All Faculty and Research Staff Publications

Export 9231 results:
2018
Mitok KA, Freiberger EC, Schueler KL, Rabaglia ME, Stapleton DS, Kwiecien NW, Malec PA, Hebert AS, Broman AT, Kennedy RT, et al. Islet proteomics reveals genetic variation in dopamine production resulting in altered insulin secretion. Journal of Biological Chemistry. 2018 ;293:5860-5877.
Wang YH, Goldsmith ZK, Schneider PE, Anson CW, Gerken JB, Ghosh S, Hammes-Schiffer S, Stahl SS. Kinetic and Mechanistic Characterization of Low-Overpotential, H2O2-Selective Reduction of O-2 Catalyzed by N2O2-Ligated Cobalt Complexes. Journal of the American Chemical Society. 2018 ;140:10890-10899.
Varela AE, Lang JF, Wu YF, Dalphin MD, Stangl AJ, Okuno Y, Cavagnero S. Kinetic Trapping of Folded Proteins Relative to Aggregates under Physiologically Relevant Conditions. Journal of Physical Chemistry B. 2018 ;122:7682-7698.
Ma FF, Sun RX, Tremmel DM, Sacket SD, Odorico J, Li LJ. Large-Scale Differentiation and Site Specific Discrimination of Hydroxyproline Isomers by Electron Transfer/Higher-Energy Collision Dissociation (EThcD) Mass Spectrometry. Analytical Chemistry. 2018 ;90:5857-5864.
Yao M, Chen BM, Zhao WP, Mehl JT, Li LJ, Zhu MS. LC-MS Differential Analysis for Fast and Sensitive Determination of Biotransformation of Therapeutic Proteins. Drug Metabolism and Disposition. 2018 ;46:451-457.
Shea MJ, Wang JL, Flach JT, Zanni MT, Arnold MS. Less severe processing improves carbon nanotube photovoltaic performance. APL Materials. 2018 ;6.
Wang D, Weinstein AB, White PB, Stahl SS. Ligand-Promoted Palladium-Catalyzed Aerobic Oxidation Reactions. Chemical Reviews. 2018 ;118:2636-2679.
Das A, Rahimi A, Ulbrich A, Alherech M, Motagamwala AH, Bhalla A, Sousa LD, Balan V, Dumesic JA, Hegg EL, et al. Lignin Conversion to Low-Molecular-Weight Aromatics via an Aerobic Oxidation-Hydrolysis Sequence: Comparison of Different Lignin Sources. Acs Sustainable Chemistry & Engineering. 2018 ;6:3367-3374.
Wan C, Horak EH, King J, Salman J, Zhang Z, Zhou Y, Roney P, Gundlach B, Ramanathan S, Goldsmith RH, et al. Limiting Optical Diodes Enabled by the Phase Transition of Vanadium Dioxide. ACS Photonics. 2018 ;5:2688-2692.
Olenick LL, Troiano JM, Vartanian A, Melby ES, Mensch AC, Zhang LL, Hong JW, Mesele O, Qiu T, Bozich J, et al. Lipid Corona Formation from Nanoparticle Interactions with Bilayers. Chem. 2018 ;4:2709-2723.
Hutchins PD, Russell JD, Coon JJ. LipiDex: An Integrated Software Package for High-Confidence Lipid Identification. Cell Systems. 2018 ;6:621-+.
Nayani K, Rai P, Bao NQ, Yu HZ, Mavrikakis M, Twieg RJ, Abbott NL. Liquid Crystals with Interfacial Ordering that Enhances Responsiveness to Chemical Targets. Advanced Materials. 2018 ;30.
Cesnik AJ, Yang B, Truong A, Etheridge T, Spiniello M, Steinbrink MI, Shortreed MR, Frey BL, Jarrard DF, Smith LM. Long Noncoding RNAs AC009014.3 and Newly Discovered XPLAID Differentiate Aggressive and Indolent Prostate Cancers. Transl Oncol. 2018 ;11:808-814.
Cao Y, Yu H, Abbott NL, Zavala VM. Machine Learning Algorithms for Liquid Crystal-Based Sensors. ACS Sensors. 2018 ;3:2237-2245.
Zhi B, Cui Y, Wang SY, Frank BP, Williams DN, Brown RP, Melby ES, Hamers RJ, Rosenzweig Z, Fairbrother DH, et al. Malic Acid Carbon Dots: From Super-resolution Live-Cell Imaging to Highly Efficient Separation. Acs Nano. 2018 ;12:5741-5752.
Hinton DA, Ng JD, Sun J, Lee S, Saikin SK, Logsdon J, White DS, Marquard AN, Cavell AC, Krasecki VK, et al. Mapping Forbidden Emission to Structure in Self-Assembled Organic Nanoparticles. Journal of the American Chemical Society. 2018 ;140:15827-15841.
Buchberger AR, DeLaney K, Johnson J, Li LJ. Mass Spectrometry Imaging: A Review of Emerging Advancements and Future Insights. Analytical Chemistry. 2018 ;90:240-265.
Trivedi RR, Crooks JA, Auer GK, Pendry J, Foik IP, Siryaporn A, Abbott NL, Gitai Z, Weibel DB. Mechanical Genomic Studies Reveal the Role of d-Alanine Metabolism in Pseudomonas aeruginosa Cell Stiffness. Mbio. 2018 ;9.
Wysoczynski-Horita CL, Boursier ME, Hill R, Hansen K, Blackwell HE, Churchill MEA. Mechanism of agonism and antagonism of the Pseudomonas aeruginosa quorum sensing regulator QscR with non-native ligands. Molecular MicrobiologyMolecular Microbiology. 2018 ;108:240-257.
Mannel DS, King J, Preger Y, Ahmed MS, Root TW, Stahl SS. Mechanistic Insights into Aerobic Oxidative Methyl Esterification of Primary Alcohols with Heterogeneous PdBiTe Catalystsy. Acs Catalysis. 2018 ;8:1038-1047.
Hermes ED, Janes AN, Schmidt JR. Mechanistic Insights into Solution-Phase Oxidative Esterification of Primary Alcohols on Pd(111) from First-Principles Microkinetic Modeling. ACS Catalysis. 2018 ;8:272-282.
Smart TJ, Cardiel AC, Wu F, Choi KS, Ping Y. Mechanistic insights of enhanced spin polaron conduction in CuO through atomic doping. Npj Computational Materials. 2018 ;4.
Yang ZL, Choi H, Weisshaar JC. Melittin-Induced Permeabilization, Re-sealing, and Re-permeabilization of E-coli Membranes. Biophysical Journal. 2018 ;114:368-379.
Tansukawat ND, See AE, Jiranuntarat S, Corbin JR, Schomaker JM. Method for Small-Scale Production of Deuterochloroform. Journal of Organic Chemistry. 2018 ;83:8739-8742.
Plummer IH, Johnson CJ, Chesney AR, Pedersen JA, Samuel MD. Mineral licks as environmental reservoirs of chronic wasting disease prions. PLoS One. 2018 ;13.
Anon. Department of Chemistry Newsletter for 07/02/2018.
2018
Mohapatra S, Weisshaar JC. Modified Pearson correlation coefficient for two-color imaging in spherocylindrical cells. Bmc Bioinformatics. 2018 ;19.
Vakirlis N, Hebert AS, Opulente DA, Achaz G, Hittinger CT, Fischer G, Coon JJ, Lafontaine I. A Molecular Portrait of De Novo Genes in Yeasts. Molecular Biology and Evolution. 2018 ;35:631-645.
Martin-Garrido A, Biesiadecki BJ, Salhi HE, Shaifta Y, Remedios CG dos, Ayaz-Guner S, Cai WX, Ge Y, Avkiran M, Kentish JC. Monophosphorylation of cardiac troponin-I at Ser-23/24 is sufficient to regulate cardiac myofibrillar Ca2+ sensitivity and calpain-induced proteolysis. Journal of Biological Chemistry. 2018 ;293:8588-8599.
Fu YP, Zheng WH, Wang XX, Hautzinger MP, Pan DX, Dang LN, Wright JC, Pan AL, Jin S. Multicolor Heterostructures of Two-Dimensional Layered Halide Perovskites that Show Interlayer Energy Transfer. Journal of the American Chemical Society. 2018 ;140:15675-15683.
Zhang YZ, DeLaney K, Hui LM, Wang JH, Sturm RM, Li LJ. A Multifaceted Mass Spectrometric Method to Probe Feeding Related Neuropeptide Changes in Callinectes sapidus and Carcinus maenas. Journal of the American Society for Mass Spectrometry. 2018 ;29:948-960.
Lapointe CP, Stefely JA, Jochem A, Hutchins PD, Wilson GM, Kwiecien NW, Coon JJ, Wickens M, Pagliarini DJ. Multi-omics Reveal Specific Targets of the RNA-Binding Protein Puf3p and Its Orchestration of Mitochondrial Biogenesis. Cell Systems. 2018 ;6:125-+.
Overmyer KA, Tyanova S, Hebert AS, Westphall MS, Cox J, Coon JJ. Multiplexed proteome analysis with neutron-encoded stable isotope labeling in cells and mice. Nature Protocols. 2018 ;13:293-306.
Kim YK, Huang YR, Tsuei M, Wang X, Gianneschi NC, Abbott NL. Multi-Scale Responses of Liquid Crystals Triggered by Interfacial Assemblies of Cleavable Homopolymers. Chemphyschem. 2018 ;19:2037-2045.
Kim SH, Stiles SG, Feichtmeier JM, Ramesh N, Zhan L, Scalf MA, Smith LM, U. Pandey B, Tibbetts RS. Mutation-dependent aggregation and toxicity in a Drosophila model for UBQLN2-associated ALS. Human Molecular Genetics. 2018 ;27:322-337.
Hirshberg B, Molina EAR, Gotz AW, Hammerich AD, Nathanson GM, Bertram TH, Johnson MA, Gerber RB. N2O5 at water surfaces: binding forces, charge separation, energy accommodation and atmospheric implications. Physical Chemistry Chemical Physics. 2018 ;20:17961-17976.
Shearer MJ, Li MY, Li LJ, Jin S, Hamers RJ. Nanoscale Surface Photovoltage Mapping of 2D Materials and Heterostructures by Illuminated Kelvin Probe Force Microscopy. Journal of Physical Chemistry C. 2018 ;122:13564-13571.
Nori-Shargh D, Weinhold F. Natural Bond Orbital Theory of Pseudo-Jahn-Teller Effects. Journal of Physical Chemistry A. 2018 ;122:4490-4498.
Glendening ED, Weinhold F. Natural resonance theory of chemical reactivity, with illustrative application to intramolecular Claisen rearrangement. Tetrahedron. 2018 ;74:4799-4804.
MacGilvray ME, Shishkova E, Chasman D, Place M, Gitter A, Coon JJ, Gasch AP. Network inference reveals novel connections in pathways regulating growth and defense in the yeast salt response. Plos Computational Biology. 2018 ;14.
Yang N, Anapindi KDB, Rubakhin SS, Wei PL, Yu Q, Li LJ, Kenny PJ, Sweedler JV. Neuropeptidomics of the Rat Habenular Nuclei. Journal of Proteome Research. 2018 ;17:1463-1473.
Van Vleet MJ, Misquitta AJ, Schmidt JR. New Angles on Standard Force Fields: Toward a General Approach for Treating Atomic-Level Anisotropy. Journal of Chemical Theory and Computation. 2018 ;14:739-758.
Brown TR, Lange JP, Mortimer MJ, Berry JF. New Oxypyridinate Paddlewheel Ligands for Alkane-Soluble, Sterically-Protected Ru-2(II,III) and Ru-2(II,II) Complexes. Inorganic Chemistry. 2018 ;57:10331-10340.
DeLaney K, Buchberger AR, Atkinson L, Grunder S, Mousley A, Li LJ. New techniques, applications and perspectives in neuropeptide research. Journal of Experimental Biology. 2018 ;221.
Rafiee M, Wang F, Hruszkewycz DP, Stahl SS. N-Hydroxyphthalimide-Mediated Electrochemical Iodination of Methylarenes and Comparison to Electron-Transfer-Initiated C-H Functionalization. Journal of the American Chemical Society. 2018 ;140:22-25.
Chen GJ, Ma B, Xie RS, Wang YY, Dou KF, Gong S. NIR-induced spatiotemporally controlled gene silencing by upconversion nanoparticle-based siRNA nanocarrier. Journal of Controlled Release. 2018 ;282:148-155.
Styles MJ, Blackwell HE. Non-native autoinducer analogs capable of modulating the SdiA quorum sensing receptor in Salmonella enterica serovar Typhimurium. Beilstein Journal of Organic Chemistry. 2018 ;14:2651-2664.
Wei LM, Gregorich ZR, Lin ZQ, Cai WX, Jin YT, McKiernan SH, McIlwain S, Aiken JM, Moss RL, Diffee GM, et al. Novel Sarcopenia-related Alterations in Sarcomeric Protein Post-translational Modifications (PTMs) in Skeletal Muscles Identified by Top-down Proteomics. Molecular & Cellular Proteomics. 2018 ;17:148-159.
Kontur WS, Bingman CA, Olmsted CN, Wassarman DR, Ulbrich A, Gall DL, Smith RW, Yusko LM, Fox BG, Noguera DR, et al. Novosphingobium aromaticivorans uses a Nu-class glutathione S-transferase as a glutathione lyase in breaking the beta-aryl ether bond of lignin. Journal of Biological Chemistry. 2018 ;293:4955-4968.
Chada JP, Xu ZR, Zhao DT, Watson RB, Brammer M, Bigi M, Rosenfeld DC, Hermans I, Huber GW. Oligomerization of 1-butene over carbon-supported CoOx and subsequent isomerization/hydroformylation to n-nonanal. Catalysis Communications. 2018 ;114:93-97.

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