All Faculty and Research Staff Publications

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2016
Ghosh A, Serrano AL, Oudenhoven TA, Ostrander JS, Eklund EC, Blair AF, Zanni MT. Experimental implementations of 2D IR spectroscopy through a horizontal pulse shaper design and a focal plane array detector. Optics Letters. 2016 ;41:524-527.
Kratochvil HT, Carr JK, Matulef K, Annen AW, Li H, Maj M, Ostmeyer J, Serrano AL, Raghuraman H, Moran SD, et al. Instantaneous ion configurations in the K+ ion channel selectivity filter revealed by 2D IR spectroscopy. Science (Washington, D. C.). 2016 ;343:1040-1044.
O. Tianqi Z, Grechko M, D. Sean M, Zanni MT. Isotope-Labeled Amyloids via Synthesis, Expression, and Chemical Ligation for Use in FTIR, 2D IR, and NMR Studies. Methods in Molecular Biology. 2016 ;1345:21-41.
Mehlenbacher RD, McDonough TJ, Kearns NM, Shea MJ, Joo Y, Gopalan P, Arnold MS, Zanni MT. Polarization-Controlled Two-Dimensional White-Light Spectroscopy of Semiconducting Carbon Nanotube Thin Films. Journal of Physical Chemistry C. 2016 ;120:17069-17080.
Ostrander JS, Serrano AL, Ghosh A, Zanni MT. Spatially Resolved Two-Dimensional Infrared Spectroscopy via Wide-Field Microscopy. ACS Photonics. 2016 ;3:1315-1323.
Abedini A, Plesner A, Cao P, Ridgway Z, Zhang JH, Tu LH, Middleton CT, Chao B, Sartori DJ, Meng FL, et al. Time-resolved studies define the nature of toxic IAPP intermediates, providing insight for anti-amyloidosis therapeutics. eLife. 2016 ;5.
Zanni MT. Two-dimensional infrared spectroscopy measures the structural dynamics of a self-assembled film only one molecule thick. Proceedings of the National Academy of Sciences of the United States of America. 2016 ;113:4890-4891.
Mehlenbacher RD, Wang JL, Kearns NM, Shea MJ, Flach JT, McDonough TJ, Wu MY, Arnold MS, Zanni MT. Ultrafast Exciton Hopping Observed in Bare Semiconducting Carbon Nanotube Thin Films with Two-Dimensional White-Light Spectroscopy. Journal of Physical Chemistry Letters. 2016 ;7:2024-2031.
Roy S, Skoff D, Perroni DV, Mondal J, Yethiraj A, Mahanthappa MK, Zanni MT, Skinner JL. Water Dynamics in Gyroid Phases of Self-Assembled Gemini Surfactants. Journal of the American Chemical Society. 2016 ;138:2472-2475.
2017
Zhang TO, Alperstein AM, Zanni MT. Amyloid beta-Sheet Secondary Structure Identified in UV-Induced Cataracts of Porcine Lenses using 2D IR Spectroscopy. Journal of Molecular Biology. 2017 ;429:1705-1721.
Kearns NM, Mehlenbacher RD, Jones AC, Zanni MT. Broadband 2D electronic spectrometer using white light and pulse shaping: noise and signal evaluation at 1 and 100 kHz. Optics Express. 2017 ;25:7869-7883.
Ostrander JS, Knepper R, Tappan AS, Kay JJ, Zanni MT, Farrow DA. Energy Transfer Between Coherently Delocalized States in Thin Films of the Explosive Pentaerythritol Tetranitrate (PETN) Revealed by Two-Dimensional Infrared Spectroscopy. Journal of Physical Chemistry B. 2017 ;121:1352-1361.
Serrano AL, Lomont JP, Tu LH, Raleigh DP, Zanni MT. A Free Energy Barrier Caused by the Refolding of an Oligomeric Intermediate Controls the Lag Time of Amyloid Formation by hIAPP. Journal of the American Chemical Society. 2017 ;139:16748-16758.
Yano Y, Kondo K, Watanabe Y, Zhang TQO, Ho JJ, Oishi S, Fujii N, Zanni MT, Matsuzaki K. GXXXG-Mediated Parallel and Antiparallel Dimerization of Transmembrane Helices and Its Inhibition by Cholesterol: Single-Pair FRET and 2D IR Studies. Angewandte Chemie-International Edition. 2017 ;56:1756-1759.
Bhattacharyya K, Liu GY, Zanni MT. "New Physical Chemistry Insight" in Experimental Bio-Physical Chemistry. Journal of Physical Chemistry B. 2017 ;121:6455-6455.
Lomont JP, Ostrander JS, Ho JJ, Petti MK, Zanni MT. Not All beta-Sheets Are the Same: Amyloid Infrared Spectra, Transition Dipole Strengths, and Couplings Investigated by 2D IR Spectroscopy. Journal of Physical Chemistry B. 2017 ;121:8935-8945.
Kratochvil HT, Maj M, Matulef K, Annen AW, Ostmeyer J, Perozo E, Roux B, Valiyaveetil FI, Zanni MT. Probing the Effects of Gating on the Ion Occupancy of the K+ Channel Selectivity Filter Using Two-Dimensional Infrared Spectroscopy. Journal of the American Chemical Society. 2017 ;139:8837-8845.
Wang JL, Shea MJ, Flach JT, McDonough TJ, Way AJ, Zanni MT, Arnold MS. Role of Defects as Exciton Quenching Sites in Carbon Nanotube Photovoltaics. Journal of Physical Chemistry C. 2017 ;121:8310-8318.
Schneider SH, Kratochvil HT, Zanni MT, Boxer SG. Solvent-Independent Anharmonicity for Carbonyl Oscillators. Journal of Physical Chemistry B. 2017 ;121:2331-2338.
McDonough TJ, Zhang LS, Roy SS, Kearns NM, Arnold MS, Zanni MT, Andrew TL. Triplet exciton dissociation and electron extraction in graphene-templated pentacene observed with ultrafast spectroscopy. Physical Chemistry Chemical Physics. 2017 ;19:4809-4820.
Ghosh A, Ostrander JS, Zanni MT. Watching Proteins Wiggle: Mapping Structures with Two Dimensional Infrared Spectroscopy. Chemical Reviews. 2017 ;117:10726-10759.
2018
Saraswat V, Jacobberger RM, Ostrander JS, Hummell CL, Way AJ, Wang J, Zanni MT, Arnold MS. Invariance of Water Permeance through Size-Differentiated Graphene Oxide Laminates. Acs Nano. 2018 ;12:7855-7865.
Shea MJ, Wang JL, Flach JT, Zanni MT, Arnold MS. Less severe processing improves carbon nanotube photovoltaic performance. APL Materials. 2018 ;6.
Maj M, Lomont JP, Rich KL, Alperstein AM, Zanni MT. Site-specific detection of protein secondary structure using 2D IR dihedral indexing: a proposed assembly mechanism of oligomeric hIAPP. Chemical Science. 2018 ;9:463-474.
Lomont JP, Rich KL, Maj M, Ho JJ, Ostrander JS, Zanni MT. Spectroscopic Signature for Stable beta-Amyloid Fibrils versus beta-Sheet-Rich Oligomers. Journal of Physical Chemistry B. 2018 ;122:144-153.
Buchanan LE, Maj M, Dunkelberger EB, Cheng PN, Nowick JS, Zanni MT. Structural Polymorphs Suggest Competing Pathways for the Formation of Amyloid Fibrils That Diverge from a Common Intermediate Species. Biochemistry. 2018 ;57:6470-6478.
Mandal A, Chen M, Foszcz ED, Schultz JD, Kearns NM, Young RM, Zanni MT, Wasielewski MR. Two-Dimensional Electronic Spectroscopy Reveals Excitation Energy-Dependent State Mixing during Singlet Fission in a Terrylenediimide Dimer. Journal of the American Chemical Society. 2018 ;140:17907-17914.
Petti MK, Lomont JP, Maj M, Zanni MT. Two-Dimensional Spectroscopy Is Being Used to Address Core Scientific Questions in Biology and Materials Science. Journal of Physical Chemistry B. 2018 ;122:1771-1780.

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