All Faculty and Research Staff Publications

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2017
Zhang XM, Jiang S, Mitok KA, Li LJ, Attie AD, Martin TFJ. BAIAP3, a C2 domain-containing Munc13 protein, controls the fate of dense-core vesicles in neuroendocrine cells. Journal of Cell Biology. 2017 ;216:2151-2166.
Chen Z, Zhong X, Tie C, Chen B, Zhang X, Li LJ. Development of a hydrophilic interaction liquid chromatography coupled with matrix-assisted laser desorption/ionization-mass spectrometric imaging platform for N-glycan relative quantitation using stable-isotope labeled hydrazide reagents. Analytical and Bioanalytical Chemistry. 2017 ;409:4437-4447.
Cheloha RW, Chen BM, Kumar NN, Watanabe T, Thorne RG, Li LJ, Gardella TJ, Gellman SH. Development of Potent, Protease-Resistant Agonists of the Parathyroid Hormone Receptor with Broad beta Residue Distribution. Journal of Medicinal Chemistry. 2017 ;60:8816-8833.
Yu Q, Wang B, Chen Z, Urabe G, Glover MS, Shi X, Guo L-W, K. Kent C, Li LJ. Electron-Transfer/Higher-Energy Collision Dissociation (EThcD)-Enabled Intact Glycopeptide/Glycoproteome Characterization. Journal of the American Society for Mass Spectrometry. 2017 :Ahead of Print.
Fouque KJD, Garabedian A, Porter J, Baird M, Pang XQ, Williams TD, Li LJ, Shvartsburg A, Fernandez-Lima F. Fast and Effective Ion Mobility-Mass Spectrometry Separation of D-Amino-Acid-Containing Peptides. Analytical Chemistry. 2017 ;89:11787-11794.
Gemperline E, Horn HA, DeLaney K, Currie CR, Li LJ. Imaging with Mass Spectrometry of Bacteria on the Exoskeleton of Fungus-Growing Ants. ACS Chemical Biology. 2017 ;12:1980-1985.
Yu Q, Shi XD, Feng Y, Kent KC, Li LJ. Improving data quality and preserving HCD-generated reporter ions with EThcD for isobaric tag-based quantitative proteomics and proteome-wide PTM studies. Analytica Chimica Acta. 2017 ;968:40-49.
Hao L, Johnson J, Lietz CB, Buchberger A, Frost D, Kao WJ, Li LJ. Mass Defect-Based N,N-Dimethyl Leucine Labels for Quantitative Proteomics and Amine Metabolomics of Pancreatic Cancer Cells. Analytical Chemistry. 2017 ;89:1138-1146.
Liu FB, Ma FF, Wang YY, Hao L, Zeng H, Jia CX, Wang YD, Liu P, Ong IM, Li BB, et al. PKM2 methylation by CARM1 activates aerobic glycolysis to promote tumorigenesis. Nature Cell Biology. 2017 ;19:1358-+.
Ye H, Wang JX, Tian ZC, Ma FF, Dowell J, Bremer Q, Lu GY, Baldo B, Li LJ. Quantitative Mass Spectrometry Reveals Food Intake-Induced Neuropeptide Level Changes in Rat Brain: Functional Assessment of Selected Neuropeptides as Feeding Regulators. Molecular & Cellular Proteomics. 2017 ;16:1922-1937.
Chen RB, Liu Y, Zhuang H, Yang BC, Hei KW, Xiao MM, Hou CY, Gao HJ, Zhang XR, Jia CX, et al. Quantitative proteomics reveals that long non-coding RNA MALAT1 interacts with DBC1 to regulate p53 acetylation. Nucleic Acids Research. 2017 ;45:9947-9959.
Zhu YC, Takayama T, Wang BW, Kent A, Zhang MX, Binder BYK, Urabe G, Shi YT, DiRenzo D, Goel SA, et al. Restenosis Inhibition and Re-differentiation of TGF beta/Smad3-activated Smooth Muscle Cells by Resveratrol. Scientific Reports. 2017 ;7.
Pang XQ, Jia CX, Chen ZW, Li LJ. Structural Characterization of Monomers and Oligomers of D-Amino Acid-Containing Peptides Using T-Wave Ion Mobility Mass Spectrometry. Journal of the American Society for Mass Spectrometry. 2017 ;28:110-118.
Pang X, Jia C, Chen Z, Li LJ. Structural Characterization of Monomers and Oligomers of D-Amino Acid-Containing Peptides Using T-Wave Ion Mobility Mass Spectrometry. Journal of the American Society for Mass Spectrometry. 2017 ;28:110-118.
Yu Q, Canales A, Glover MS, Das R, Shi XD, Liu Y, Keller MP, Attie AD, Li LJ. Targeted Mass Spectrometry Approach Enabled Discovery of O-Glycosylated Insulin and Related Signaling Peptides in Mouse and Human Pancreatic Islets. Analytical Chemistry. 2017 ;89:9184-9191.
2016
Thomas S, Hao L, Ricke WA, Li LJ. Biomarker discovery in mass spectrometry-based urinary proteomics. Proteomics Clinical Applications. 2016 ;10:358-370.
Yu Q, Shi X, Greer T, Lietz CB, K. Kent C, Li LJ. Evaluation and Application of Dimethylated Amino Acids as Isobaric Tags for Quantitative Proteomics of the TGF-β/Smad3 Signaling Pathway. Journal of Proteome Research. 2016 ;15:3420-3431.
Gemperline E, Keller C, Jayaraman D, Maeda J, Sussman MR, Ane JM, Li LJ. Examination of Endogenous Peptides in Medicago truncatula Using Mass Spectrometry Imaging. Journal of Proteome Research. 2016 ;15:4403-4411.
Lu JF, Zhong XF, Liu HS, Hao L, Huang CTL, Sherafat MA, Jones J, Ayala M, Li LJ, Zhang SC. Generation of serotonin neurons from human pluripotent stem cells. Nature Biotechnology. 2016 ;34:89-94.
Hullinger R, Li M, Wang JX, Peng YJ, Dowell JA, Bomba-Warczak E, Mitchell HA, Burger C, Chapman ER, Denu JM, et al. Increased expression of AT-1/SLC33A1 causes an autistic-like phenotype in mice by affecting dendritic branching and spine formation. Journal of Experimental Medicine. 2016 ;213:1267-1284.
Hao L, Greer T, Page D, Shi YT, Vezina CM, Macoska JA, Marker PC, Bjorling DE, Bushman W, Ricke WA, et al. In-Depth Characterization and Validation of Human Urine Metabolomes Reveal Novel Metabolic Signatures of Lower Urinary Tract Symptoms. Scientific Reports. 2016 ;6.
Keil KP, Abler LL, Altmann HM, Bushman W, Marker PC, Li LJ, Ricke WA, Bjorling DE, Vezina CM. Influence of animal husbandry practices on void spot assay outcomes in C57BL/6J male mice. Neurourology and Urodynamics. 2016 ;35:192-198.
Jiang S, Liang ZD, Hao L, Li LJ. Investigation of signaling molecules and metabolites found in crustacean hemolymph via in vivo microdialysis using a multifaceted mass spectrometric platform. Electrophoresis. 2016 ;37:1031-1038.
Wang JX, Cunningham R, Zetterberg H, Asthana S, Carlsson C, Okonkwo O, Li LJ. Label-free quantitative comparison of cerebrospinal fluid glycoproteins and endogenous peptides in subjects with Alzheimer's disease, mild cognitive impairment, and healthy individuals. Proteomics Clinical Applications. 2016 ;10:1225-1241.
Gemperline E, Keller C, Li LJ. Mass Spectrometry in Plant-omics. Analytical Chemistry. 2016 ;88:3422-3434.
Chen BM, Lietz CB, Ouyang CZ, Zhong XF, Xu M, Li LJ. Matrix-assisted ionization vacuum for protein detection, fragmentation and PTM analysis on a high resolution linear ion trap-orbitrap platform. Analytica Chimica Acta. 2016 ;916:52-59.
Lietz CB, Chen Z, Son CYun, Pang X, Cui Q, Li LJ. Multiple gas-phase conformations of proline-containing peptides: is it always cis/trans isomerization?. Analyst. 2016 ;141:4863-4869.
Chesney AR, Booth CJ, Lietz CB, Li LJ, Pedersen JA. Peroxymonosulfate Rapidly Inactivates the Disease-Associated Prion Protein. Environmental Science & Technology. 2016 ;50:7095-7105.
Zhong XF, Hao L, Lu JF, Ye H, Zhang SC, Li LJ. Quantitative analysis of serotonin secreted by human embryonic stem cells-derived serotonergic neurons via pH-mediated online stacking-CE-ESI-MRM. Electrophoresis. 2016 ;37:1027-1030.
Jia C, Lietz CB, Yu Q, Li LJ. Site-specific Localization of D-Amino Acids in Bioactive Peptides by Ion Mobility Spectrometry. Neuromethods. 2016 ;114:43-53.
2015
Buchberger A, Yu Q, Li LJ. Advances in Mass Spectrometric Tools for Probing Neuropeptides. Annual Review of Analytical Chemistry. 2015 ;8:485-509.
Cohen HCaitlin, Frost DC, Lieberthal TJacob, Li LJ, W. Kao J. Biomaterials differentially regulate Src kinases and phosphoinositide 3-kinase-γ in polymorphonuclear leukocyte primary and tertiary granule release. Biomaterials. 2015 ;50:47-55.
Zhong XF, Chen ZW, Snovida S, Liu Y, Rogers JC, Li LJ. Capillary Electrophoresis-Electrospray Ionization-Mass Spectrometry for Quantitative Analysis of Glycans Labeled with Multiplex Carbonyl-Reactive Tandem Mass Tags. Analytical Chemistry. 2015 ;87:6527-6534.
Greer T, Hao L, Nechyporenko A, Lee S, Vezina CM, Ricke WA, Marker PC, Bjorling DE, Bushman W, Li LJ. Custom 4-Plex DiLeu Isobaric Labels Enable Relative Quantification of Urinary Proteins in Men with Lower Urinary Tract Symptoms (LUTS). Plos One. 2015 ;10.
Schmerberg CM, Liang ZD, Li LJ. Data-Independent MS/MS Quantification of Neuropeptides for Determination of Putative Feeding-Related Neurohormones in Microdialysate. ACS Chemical Neuroscience. 2015 ;6:174-180.
Ye H, Wang JX, Zhang ZC, Jia CX, Schmerberg C, Catherman AD, Thomas PM, Kelleher NL, Li LJ. Defining the Neuropeptidome of the Spiny Lobster Panulirus interruptus Brain Using a Multidimensional Mass Spectrometry-Based Platform. Journal of Proteome Research. 2015 ;14:4776-4791.
Frost DC, Greer T, Xiang F, Liang ZD, Li LJ. Development and characterization of novel 8-plex DiLeu isobaric labels for quantitative proteomics and peptidomics. Rapid Communications in Mass Spectrometry. 2015 ;29:1115-1124.
Zhang YZ, Buchberger A, Muthuvel G, Li LJ. Expression and distribution of neuropeptides in the nervous system of the crab Carcinus maenas and their roles in environmental stress. Proteomics. 2015 ;15:3969-3979.
Ouyang CZ, Chen BM, Li LJ. High Throughput In Situ DDA Analysis of Neuropeptides by Coupling Novel Multiplex Mass Spectrometric Imaging (MSI) with Gas-Phase Fractionation. Journal of the American Society for Mass Spectrometry. 2015 ;26:1992-2001.
Frost DC, Greer T, Li LJ. High-Resolution Enabled 12-Plex DiLeu Isobaric Tags for Quantitative Proteomics. Analytical Chemistry. 2015 ;87:1646-1654.
Ouyang CZ, Liang ZD, Li LJ. Mass spectrometric analysis of spatio-temporal dynamics of crustacean neuropeptides. Biochimica Et Biophysica Acta-Proteins and Proteomics. 2015 ;1854:798-811.
Liang ZD, Schmerberg CM, Li LJ. Mass spectrometric measurement of neuropeptide secretion in the crab, Cancer borealis, by in vivo microdialysis. Analyst. 2015 ;140:3803-3813.
Gemperline E, Jayaraman D, Maeda J, Ane JM, Li LJ. Multifaceted Investigation of Metabolites During Nitrogen Fixation in Medicago via High Resolution MALDI-MS Imaging and ESI-MS. Journal of the American Society for Mass Spectrometry. 2015 ;26:149-158.
Greer T, Lietz CB, Xiang F, Li LJ. Novel isotopic N,N-Dimethyl Leucine (iDiLeu) Reagents Enable Absolute Quantification of Peptides and Proteins Using a Standard Curve Approach. Journal of the American Society for Mass Spectrometry. 2015 ;26:107-119.
Jiang S, Zhang ZC, Li LJ. A one-step preparation method of monolithic enzyme reactor for highly efficient sample preparation coupled to mass spectrometry-based proteomics studies. Journal of Chromatography A. 2015 ;1412:75-81.
Gushue D, Herbst A, Li LJ, McKenzie D, Aiken J. Pre-clinical biomarkers of prion infection. Prion. 2015 ;9:S51-S52.
Hao L, Zhong XF, Greer T, Ye H, Li LJ. Relative quantification of amine-containing metabolites using isobaric N,N-dimethyl leucine (DiLeu) reagents via LC-ESI-MS/MS and CE-ESI-MS/MS. Analyst. 2015 ;140:467-475.
Cheng J, Li WX, Kang B, Zhou YW, Song JS, Dan SS, Yang Y, Zhang XQ, Li JC, Yin SY, et al. Tryptophan derivatives regulate the transcription of Oct4 in stem-like cancer cells. Nature Communications. 2015 ;6.

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