All Department Publications

Found 264 results
Author [ Title(Desc)] Type Year
Filters: Author is Record, M. T.  [Clear All Filters]
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2
Suh WC, Ross W, Record MT. 2 OPEN COMPLEXES AND A REQUIREMENT FOR MG2+ TO OPEN THE LAMBDA-P(R) TRANSCRIPTION START SITE. Science. 1993;259:358-361.
A
Cayley S, Record MT, Lewis BA. ACCUMULATION OF 3-(N-MORPHOLINO)PROPANESULFONATE BY OSMOTICALLY STRESSED ESCHERICHIA-COLI K-12. Journal of Bacteriology. 1989;171:3597-3602.
Beutel BA, Record MT. ADDITIVE AND NONADDITIVE EFFECTS OF BASE-PAIR SUBSTITUTIONS IN ESCHERICHIA-COLI PROMOTERS. Biophysical Journal. 1990;57:A65-A65.
Shaner SL, Piatt DM, Wensley CG, Yu H, Burgess RR, Record MT. AGGREGATION EQUILIBRIA OF ESCHERICHIA-COLI RNA-POLYMERASE - EVIDENCE FOR ANION-LINKED CONFORMATIONAL TRANSITIONS IN THE PROTOMERS OF CORE AND HOLOENZYME. Biochemistry. 1982;21:5539-5551.
Shaner SL, Burgess RR, Record MT. AGGREGATION OF RNA-POLYMERASE. Biophysical Journal. 1981;33:A257-A257.
Wensley CG, Strauss HS, Burgess RR, Record MT. AGGREGATION REACTIONS AND T7 DNA BINDING OF E-COLI RNA-POLYMERASE. Biophysical Journal. 1977;17:A238-A238.
Guttman HJ, Anderson CF, Record MT. ANALYSES OF THERMODYNAMIC DATA FOR CONCENTRATED HEMOGLOBIN-SOLUTIONS USING SCALED PARTICLE THEORY - IMPLICATIONS FOR A SIMPLE 2-STATE MODEL OF WATER IN THERMODYNAMIC ANALYSES OF CROWDING IN-VITRO AND IN-VIVO. Biophysical Journal. 1995;68:835-846.
Record MT, Zhang WT, Anderson CF. Analysis of effects of salts and uncharged solutes on protein and nucleic acid equilibria and processes: A practical guide to recognizing and interpreting polyelectrolyte effects, Hofmeister effects, and osmotic effects of salts. Advances in Protein Chemistry, Vol 51. 1998;51:281-353.
Record MT, Ha JH, Fisher MA. ANALYSIS OF EQUILIBRIUM AND KINETIC MEASUREMENTS TO DETERMINE THERMODYNAMIC ORIGINS OF STABILITY AND SPECIFICITY AND MECHANISM OF FORMATION OF SITE-SPECIFIC COMPLEXES BETWEEN PROTEINS AND HELICAL DNA. Methods in Enzymology. 1991;208:291-343.
Lohman TM, Dehaseth PL, Record MT. ANALYSIS OF ION CONCENTRATION EFFECTS ON KINETICS OF PROTEIN-NUCLEIC ACID INTERACTIONS - APPLICATION TO LAC REPRESSOR-OPERATOR INTERACTIONS. Biophysical Chemistry. 1978;8:281-294.
Mazur SJ, Record MT. AN ANALYSIS OF THE INFLUENCE OF THE SPATIAL-DISTRIBUTION OF THE SITES ON THE KINETICS OF PROTEIN-NUCLEIC ACID REACTIONS. Biophysical Journal. 1982;37:A301-A301.
Tsodikov OV, Holbrook JA, Shkel IA, Record MT. Analytic binding isotherms describing competitive interactions of a protein ligand with specific and nonspecific sites on the same DNA oligomer. Biophysical Journal. 2001;81:1960-1969.
Cayley S, Record MT. ANIONS AFFECT THE INVITRO FUNCTION OF ENDONUCLEASE ECO RI. Journal of Cellular Biochemistry. 1987:204-204.
Felitsky DJ, Record MT. Application of the local-bulk partitioning and competitive binding models to interpret preferential interactions of glycine betaine and urea with protein surface. Biochemistry. 2004;43(28):9276-88.
Felitsky DJ, Record MT. Application of the local-bulk partitioning and competitive binding models to interpret preferential interactions of glycine betaine and urea with protein surface. BiochemistryBiochemistry. 2004;43:9276-9288.
Mazur SJ, Record MT. ASSOCIATION KINETICS OF SITE-SPECIFIC PROTEIN DNA INTERACTIONS - ROLES OF NONSPECIFIC DNA SITES AND OF THE MOLECULAR LOCATION OF THE SPECIFIC SITE. Biopolymers. 1989;28:929-953.
Shkel IA, Tsodikov OV, Record MT. Asymptotic solution of the cylindrical nonlinear Poisson-Boltzmann equation at low salt concentration: Analytic expressions for surface potential and preferential interaction coefficient. Proceedings of the National Academy of Sciences of the United States of America. 2002;99:2597-2602.
Shkel IA, Tsodikov OV, Record MT. Asymptotic solution of the cylindrical nonlinear Poisson-Boltzmann equation at low salt concentration: analytic expressions for surface potential and preferential interaction coefficient. Proc Natl Acad Sci U S A. 2002;99(5):2597-602.
B
Padmanabhan S, Zhang WT, Capp MW, Anderson CF, Record MT. Binding of cationic (+4) alanine- and glycine-containing oligopeptides to double-stranded DNA: Thermodynamic analysis of effects of coulombic interactions and alpha-helix induction. Biochemistry. 1997;36:5193-5206.
Ballin J, Capp MW, Record MT. Binding of cationic tetrapeptides to double stranded DNA: Effects of replacing lysine or arginine with histidine. Biophysical Journal. 1998;74:A69-A69.
Strauss HS, Burgess RR, Record MT. BINDING OF ESCHERICHIA-COLI RIBONUCLEIC-ACID POLYMERASE HOLOENZYME TO A BACTERIOPHAGE-T7 PROMOTER-CONTAINING FRAGMENT - EVALUATION OF PROMOTER BINDING CONSTANTS AS A FUNCTION OF SOLUTION CONDITIONS. Biochemistry. 1980;19:3504-3515.
Strauss HS, Burgess RR, Record MT. BINDING OF ESCHERICHIA-COLI RIBONUCLEIC-ACID POLYMERASE HOLOENZYME TO A BACTERIOPHAGE-T7 PROMOTER-CONTAINING FRAGMENT - SELECTIVITY EXISTS OVER A WIDE-RANGE OF SOLUTION CONDITIONS. Biochemistry. 1980;19:3496-3504.
Braunlin WH, Strick TJ, Record MT. BINDING OF POLYAMINES TO DNA. Biophysical Journal. 1981;33:A312-A312.
Cayley DS, Guttman HJ, Record MT. Biophysical characterization of changes in amounts and activity of Escherichia coli cell and compartment water and turgor pressure in response to osmotic stress. Biophysical Journal. 2000;78:1748-1764.
Record MT, Courtenay ES, Cayley S, Guttman HJ. Biophysical compensation mechanisms buffering E-coli protein-nucleic acid interactions against changing environments. Trends in Biochemical Sciences. 1998;23:190-194.
C
Garner MM, Cayley DS, Record MT. CALCULATION OF MACROMOLECULAR CROWDING EFFECTS ON PROTEIN-DNA INTERACTIONS INVIVO. Biophysical Journal. 1990;57:A62-A62.
Record MT, Woodbury CP. CHARACTERIZATION OF RODLIKE DNA FRAGMENTS. Biopolymers. 1975;14:393-408.
Cayley S, Lewis BA, Guttman HJ, Record MT. CHARACTERIZATION OF THE CYTOPLASM OF ESCHERICHIA-COLI-K-12 AS A FUNCTION OF EXTERNAL OSMOLARITY - IMPLICATIONS FOR PROTEIN DNA INTERACTIONS INVIVO. Journal of Molecular Biology. 1991;222:281-300.
Cayley S, Richey B, Mossing M, Kolka C, Record MT. COMPARISON OF ESCHERICHIA-COLI PROTEIN-DNA INTERACTIONS INVITRO AND INVIVO. Biophysical Journal. 1987;51:A148-A148.
Klein BK, Anderson CF, Record MT. COMPARISON OF POISSON-BOLTZMANN AND CONDENSATION MODEL EXPRESSIONS FOR THE COLLIGATIVE PROPERTIES OF CYLINDRICAL POLYIONS. Biopolymers. 1981;20:2263-2280.
Capp MW, Cayley DS, Zhang WT, Guttman HJ, Melcher SE, Saecker RM, Anderson CF, Record MT. Compensating effects of opposing changes in putrescine (2+) and K+ Concentrations on lac repressor-lac operator binding: In vitro thermodynamic analysis and in vivo relevance. Journal of Molecular Biology. 1996;258:25-36.
Guttman HJ, Cayley S, Anderson CF, Record MT. COMPENSATING EFFECTS OF OSMOTICALLY-INDUCED CHANGES IN CYTOPLASMIC MACROMOLECULAR CROWDING AND ELECTROLYTE CONCENTRATION ON PROTEIN-DNA INTERACTIONS IN ESCHERICHIA-COLI. Biophysical Journal. 1993;64:A238-A238.
Braunlin WH, Anderson CF, Record MT. COMPETITIVE INTERACTIONS OF CO(NH3)63+ AND NA+ WITH HELICAL B-DNA PROBED BY CO-59 AND NA-23 NMR. Biochemistry. 1987;26:7724-7731.
Shkel IA, Tsodikov OV, Record MT. Complete asymptotic solution of cylindrical and spherical Poisson-Boltzmann equations at experimental salt concentrations. Journal of Physical Chemistry B. 2000;104:5161-5170.
Bond JP, Anderson CF, Record MT. CONFORMATIONAL TRANSITIONS OF DUPLEX AND TRIPLER NUCLEIC-ACID HELICES - THERMODYNAMIC ANALYSIS OF EFFECTS OF SALT CONCENTRATION ON STABILITY USING PREFERENTIAL INTERACTION COEFFICIENTS. Biophysical Journal. 1994;67:825-836.
Frank DE, Record MT. CONTEXT DEPENDENCE OF INTERACTIONS IN LAC REPRESSOR-OPERATOR COMPLEXES. Biophysical Journal. 1994;66:A370-A370.
Livingstone JR, Spolar RS, Record MT. CONTRIBUTION TO THE THERMODYNAMICS OF PROTEIN FOLDING FROM THE REDUCTION IN WATER-ACCESSIBLE NONPOLAR SURFACE-AREA. Biochemistry. 1991;30:4237-4244.
Record MT. Contributions of large-scale coupled conformational. Biophysical Journal. 2001;80:191A-191A.
Melcher SE, Tsodikov OV, Levandoski MM, Frank DE, Saecker RM, Record MT. Contributions of non-operator DNA to the stability of 1:1 and 2:1 lac operator:lac repressor complexes. Biophysical Journal. 1997;72:MP404-MP404.
Ballin JD, Prevas JP, Ross CR, Toth EA, Wilson GM, Record MT. Contributions of the Histidine Side Chain and the N-Terminal alpha-Amino Group to the Binding Thermodynamics of Oligopeptides to Nucleic Acids as a Function of pH. Biochemistry. 2010;49:2018-2030.
Levandoski MM, Tsodikov OV, Frank DE, Melcher SE, Saecker RM, Record MT. Cooperative and anticooperative effects in binding of the first and second plasmid Osym operators to a LacI tetramer: evidence for contributions of non-operator DNA binding by wrapping and looping. J Mol Biol. 1996;260(5):697-717.
Livingstone JR, Record MT. CORRELATION BETWEEN PROTEIN STABILITY AND NONPOLAR SURFACE-AREA. Biophysical Journal. 1990;57:A417-A417.
Shkel IA, Record MT. Coulombic free energy and salt ion association per phosphate of all-atom models of DNA oligomer: dependence on oligomer size. Soft Matter. 2012;8:9345-9355.
Paulsen MD, Anderson CF, Record MT. COUNTERION EXCHANGE-REACTIONS ON DNA - MONTE-CARLO AND POISSON-BOLTZMANN ANALYSIS. Biopolymers. 1988;27:1249-1265.
Spolar RS, Record MT. COUPLING OF LOCAL FOLDING TO SITE-SPECIFIC BINDING OF PROTEINS TO DNA. Science. 1994;263:777-784.
Konopka MC, Shkel IA, Cayley S, Record MT, Weisshaar JC. Crowding and confinement effects on protein diffusion in vivo. Journal of Bacteriology. 2006;188:6115-6123.
Konopka MC, Sochacki KA, Bratton BP, Shkel IA, Record MT, Weisshaar JC. Cytoplasmic Protein Mobility in Osmotically Stressed Escherichia coli. Journal of Bacteriology. 2009;191:231-237.
D
Holbrook JA, Capp MW, Saecker RM, Record MT. Delta H degrees and for Delta C-P degrees for formation of an oligomeric DNA duplex. Biophysical Journal. 2000;78:132A-132A.
McQuade KL, Schlax PE, Record MT. Determining equilibrium constants for the binding of nucleotides to E sigma(70) RNAP-promoter open complexes from nucleotide stabilization experiments. Biophysical Journal. 1996;70:SU479-SU479.
Melancon P, Burgess RR, Record MT. DIRECT EVIDENCE FOR THE PREFERENTIAL BINDING OF ESCHERICHIA-COLI RNA-POLYMERASE HOLOENZYME TO THE ENDS OF DEOXYRIBONUCLEIC-ACID RESTRICTION FRAGMENTS. Biochemistry. 1983;22:5169-5176.

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