All Faculty and Research Staff Publications

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1996
Mouradian S, Rank DR, Smith LM. Analyzing sequencing reactions from bacteriophage M13 by matrix-assisted laser desorption/ionization mass spectrometry. Rapid Communications in Mass Spectrometry. 1996 ;10:1475-1478.
Rank D, Smith LM. Automated DNA sequencers: the next generation. Optics and Photonics News. 1996 ;7:29-33.
Yin ZB, Severin J, Giddings MC, Huang WA, Westphall MS, Smith LM. Automatic matrix determination in four dye fluorescence-based DNA sequencing. Electrophoresis. 1996 ;17:1143-1150.
Buxton EC, Westphall M, Jacobson W, Tong XC, Smith LM. Automation in large-scale DNA sequencing. Laboratory Robotics and Automation. 1996 ;8:339-349.
Brow MAD, Oldenburg MC, Lyamichev V, Heisler LM, Grotelueschen J, Lyamicheva N, Kozyavkin S, Fors L, Dahlberg JE, Smith LM, et al. The Cleavase Fragment Length Polymorphism (CFLP) assay. Biochemica. 1996 ;1:14-15.
Brow MAD, Oldenburg MC, Lyamichev V, Heisler LM, Lyamicheva N, Hall JG, Eagan NJ, Olive DM, Smith LM, Fors L, et al. Differentiation of bacterial 16S rRNA genes and intergenic regions and Mycobacterium tuberculosis katG genes by structure-specific endonuclease cleavage. Journal of Clinical Microbiology. 1996 ;34:3129-3137.
Nelson CM, Zhu L, Tang W, Smith LM, Crellin K, Berry J, Beauchamp JL. Fragmentation mechanisms of oligonucleotides in MALDI mass spectrometry. Proceedings of SPIE - The International Society for Optical Engineering. 1996 ;2680:247-255.
Smith LM, Brumley, Jr. RL, Buxton EC, Giddings M, Marchbanks M, Tong X. High-speed automated DNA sequencing in ultrathin slab gels. Methods in Enzymology. 1996 ;271:219-237.
Chen DH, Johnson AF, Severin JM, Rank DR, Smith LM, Guilfoyle RA. M13-102: A vector for facilitating construction and improving quality of M13 shotgun libraries. Gene. 1996 ;172:53-57.
Brow MAD, Oldenburg MC, Lyamichev V, Heisler LM, Grotelueschen J, Lyamicheva N, Kozyavkin S, Fors L, Dahlberg J, Smith LM, et al. Mutation detection by cleavase fragment length polymorphism. Focus. 1996 ;18:2-5.
Johnson AF, Wang RF, Ji HM, Chen DH, Guilfoyle RA, Smith LM. Purification of single-stranded M13 DNA by cooperative triple-helix-mediated affinity capture. Analytical Biochemistry. 1996 ;234:83-95.
Ji HM, Francisco T, Smith LM, Guilfoyle RA. Rapid restriction mapping of cosmids by sequence-specific triple-helix-mediated affinity capture. Genomics. 1996 ;31:185-192.
Mouradian S, Nelson CM, Smith LM. A self-assembled matrix monolayer for UV-MALDI mass spectrometry. Journal of the American Chemical Society. 1996 ;118:8639-8645.
Smith LM. Sequence from spectrometry: a realistic prospect?. Nature Biotechnology. 1996 ;14:1084, 1087.
1994
Guo Z, Guilfoyle RA, Thiel AJ, Wang R, Smith LM. Direct fluorescence analysis of genetic polymorphisms by hybridization with oligonucleotide arrays on glass supports. Nucleic Acids Research. 1994 ;22:5456-65.
Guilfoyle RA, Smith LM. A direct selection strategy for shotgun cloning and sequencing in the bacteriophage M13. Nucleic Acids Research. 1994 ;22:100-7.
Hou WY, Smith LM. DNA sequencing with a hexamer string primer and dye-labeled terminators. Analytical Biochemistry. 1994 ;221:136-141.
Denton DD, Thiel AJ, Smith LM, Bajikar S, White V, Ghodssi R, Fish G, McCaughan L. Fabrication of microstructures for use in biological and optical applications. Proceedings - Electrochemical Society. 1994 ;94-14:103-14.
Kolner DE, Guilfoyle RA, Smith LM. A high throughput system for the preparation of single stranded templates grown in microculture. DNA Sequence. 1994 ;4:253-7.
Ji H, Smith LM, Guilfoyle RA. Rapid isolation of cosmid insert DNA by triple-helix-mediated affinity capture. Genetic Analysis, Techniques and Applications. 1994 ;11:43-7.
Mouradian S, Brumley RL, Smith LM. Separating field strength, temperature, and pulsing effects in pulsed field electrophoresis. Electrophoresis. 1994 ;15:1084-1090.
Collins FS, Benjamin LJ, Botstein D, Cox JR, Davidson N, Gray JW, Holtzman N, Housman DE, Jamison KR, Nelkin D, et al. Statement on use of DNA testing for presymptomatic identification of cancer risk. JAMA. 1994 ;271:785-785.
1993
Giddings MC, Brumley, Jr. RL, Haker M, Smith LM. An adaptive, object oriented strategy for base calling in DNA sequence analysis. Nucleic Acids Research. 1993 ;21:4530-40.
Fitzgerald MC, Zhu L, Smith LM. The analysis of mock DNA sequencing reactions using matrix-assisted laser desorption/ionization mass spectrometry. Rapid Communications in Mass Spectrometry. 1993 ;7:895-897.
Luckey JA, Norris TB, Smith LM. Analysis of resolution in DNA sequencing by capillary gel electrophoresis. Journal of Physical Chemistry. 1993 ;97:3067-3075.
Smith LM. Automated DNA sequencing: a look into the future. Cancer Detection and Prevention. 1993 ;17:283-8.
Fitzgerald MC, Parr GR, Smith LM. Basic matrices for the matrix-assisted laser desorption/ionization mass spectrometry of proteins and oligonucleotides. Analytical Chemistry. 1993 ;65:3204-3211.
Smith LM. DNA electrophoresis. Current Opinion in Biotechnology. 1993 ;4:37-40.
Hou W, Smith LM. Fluorescence-based DNA sequencing with hexamer primers. Nucleic Acids Research. 1993 ;21:3331-2.
Smith LM. The future of DNA sequencing. Science. 1993 ;262:530-2.
Luckey JA, Drossman H, Kostichka T, Smith LM. High-speed DNA sequencing by capillary gel electrophoresis. Methods in Enzymology. 1993 ;218:154-72.
Luckey JA, Smith LM. A model for the mobility of single-stranded DNA in capillary gel electrophoresis. Electrophoresis. 1993 ;14:492-501.
Johnson AF, Struthers MD, Pierson KB, Mangel WF, Smith LM. Nonisotopic DNA detection system employing elastase and a fluorogenic rhodamine substrate. Analytical Chemistry. 1993 ;65:2352-9.
Luckey JA, Smith LM. Optimization of electric field strength for DNA sequencing in capillary gel electrophoresis. Analytical Chemistry. 1993 ;65:2841-2850.
Luckey JA, Smith LM. Optimization of electric field strength for DNA sequencing in capillary gel electrophoresis. Proceedings of SPIE - The International Society for Optical Engineering. 1993 ;1891:21-6.
Ji H, Smith LM. Rapid purification of double-stranded DNA by triple-helix-mediated affinity capture. Analytical Chemistry. 1993 ;65:1323-8.
Tong X, Smith LM. Solid phase purification in automated DNA sequencing. DNA Sequence. 1993 ;4:151-62.

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