All Faculty and Research Staff Publications

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Zhu X, Yethiraj A, Cui Q. Establishing effective simulation protocols for beta- and alpha/beta-mixed peptides. I. QM and QM/MM models. Journal of Chemical Theory and Computation. 2007 ;3:1538-1549.
Zhu L, Kurt N, Choi J, Lapidus LJ, Cavagnero S. Sub-millisecond Chain Collapse of the Escherichia coli Globin ApoHmpH. Journal of Physical Chemistry B. 2013 ;117:7868-7877.
Zhu M, Wang JQ, Perepezko JH, Yu L. Possible existence of two amorphous phases of D-mannitol related by a first-order transition. Journal of Chemical Physics. 2015 ;142.
Zhu YY, Mohapatra S, Weisshaar JC. Rigidification of the Escherichia coli cytoplasm by the human. Proceedings of the National Academy of Sciences of the United States Of. 2019 ;116:1017-1026.
Zhu L, Wong L, Yu L. Surface-enhanced crystallization of amorphous nifedipine. Mol Pharm. 2008 ;5:921-6.
Zhu XY, Boiadjiev V, Mulder JA, Hsung RP, Major RC. Molecular assemblies on silicon surfaces via Si-O linkages. Langmuir. 2000 ;16:6766-6772.
Zhu M, Yu L. Trans-cis isomerization energies of azopyridines: a calorimetric and computational study. Journal of Thermal Analysis and Calorimetry. 2018 ;132:463-469.
Zhu W, Gisser DJ, Ediger MD. C-13 NMR MEASUREMENTS OF POLYBUTADIENE LOCAL DYNAMICS IN DILUTE-SOLUTION - FURTHER EVIDENCE FOR NON-KRAMERS BEHAVIOR. Journal of Polymer Science Part B-Polymer Physics. 1994 ;32:2251-2262.
Zhu X, Koenig P, Gellman SH, Yethiraj A, Cui Q. Establishing Effective Simulation Protocols for β- and α/β-Peptides. II. Molecular Mechanical (MM) Model for a Cyclic β-Residue. Journal of Physical Chemistry B. 2008 ;112:5439-5448.
Zhu ZD, Bally T, Stracener LL, McMahon RJ. Reversible interconversion between singlet and triplet 2-naphthyl(carbomethoxy)carbene. Journal of the American Chemical Society. 1999 ;121:2863-2874.
Zhu L, Yu L. Generality of forming stable organic glasses by vapor deposition. Chemical Physics Letters. 2010 ;499:62-65.
Zhu ZP, Glazier DA, Yang DS, Tang WP. Catalytic Asymmetric Synthesis of All Possible Stereoisomers of 2,3,4,6-Tetradeoxy-4-Aminohexopyranosides. Advanced Synthesis & Catalysis. 2018 ;360:2211-2215.
Zhu ZP, Wang HY, Simmons C, Tseng PS, Qiu X, Zhang Y, Duan XY, Yang JK, Tang WP. Iridium-Catalyzed Dynamic Kinetic Stereoselective Allylic Etherification of Achmatowicz Rearrangement Products. Advanced Synthesis & Catalysis. 2018 ;360:595-599.
Zhu YJ, Xu J, Sun C, Zhou SG, Xu HB, Nelson DR, Qian J, Song JY, Luo HM, Xiang L, et al. Chromosome-level genome map provides insights into diverse defense mechanisms in the medicinal fungus Ganoderma sinense. Scientific Reports. 2015 ;5.
Zhu L, Brian CW, Swallen SF, Straus PT, Ediger MD, Yu L. Surface Self-Diffusion of an Organic Glass. Physical Review Letters. 2011 ;106.
Zhu W, Ediger MD. Viscosity dependence of polystyrene local dynamics in dilute solution. Macromolecules. 1997 ;30:1205-1210.
Zhu HM, Fu YP, Meng F, Wu XX, Gong ZZ, Ding Q, Gustafsson MV, Trinh MT, Jin S, Zhu XY. Lead halide perovskite nanowire lasers with low lasing thresholds and high quality factors. Nature Materials. 2015 ;14:636-U115.
Zhu X, Koenig P, Hoffmann M, Yethiraj A, Cui Q. Establishing Effective Simulation Protocols for beta- and alpha/beta-Peptides. III. Molecular Mechanical Model for Acyclic beta-Amino Acids. Journal of Computational Chemistry. 2010 ;31:2063-2077.
Zhu D, Bandy JA, Li S, Hamers RJ. Amino-terminated diamond surfaces: Photoelectron emission and photocatalytic properties. Surface ScienceSurface Science. 2016 .
Zhu L, Parr GR, Fitzgerald MC, Nelson CM, Smith LM. Oligodeoxynucleotide Fragmentation in MALDI/TOF Mass Spectrometry Using 355-nm Radiation. Journal of the American Chemical Society. 1995 ;117:6048-6056.
Zhu JH, Chen ZW, Zhang J, An MR, Wu J, Yu Q, Skilton S, Bern M, Sen KI, Li LJ, et al. Differential Quantitative Determination of Site-Specific Intact N-Glycopeptides in Serum Haptoglobin between Hepatocellular Carcinoma and Cirrhosis Using LC-EThcD-MS/MS. Journal of Proteome Research. 2019 ;18:359-371.
Zhu LL, Wu JZ, Liu L, Liu YL, Yan Y, Cui Q, Chen X. Gating mechanism of mechanosensitive channel of large conductance: a coupled continuum mechanical-continuum solvation approach. Biomechanics and Modeling in Mechanobiology. 2016 ;15:1557-1576.
Zhu L, Cai T, Huang J, Stringfellow TC, Wall M, Yu L. Water Self-Diffusion in Glassy and Liquid Maltose Measured by Raman Microscopy and NMR. Journal of Physical Chemistry B. 2011 [cited 2014/07/21];115:5849-5855.
Zhu W, Ediger MD. Polystyrene local dynamics in dilute solution: Temperature and solvent dependence of C-D vector correlation function shape. Journal of Polymer Science Part B-Polymer Physics. 1997 ;35:1241-1250.
Zhu YC, Takayama T, Wang BW, Kent A, Zhang MX, Binder BYK, Urabe G, Shi YT, DiRenzo D, Goel SA, et al. Restenosis Inhibition and Re-differentiation of TGF beta/Smad3-activated Smooth Muscle Cells by Resveratrol. Scientific Reports. 2017 ;7.
Zhu D, Zhang LH, Ruther RE, Hamers RJ. Photo-illuminated diamond as a solid-state source of solvated electrons in water for nitrogen reduction. Nature Materials. 2013 ;12:836-841.
Zhu W, Ediger MD. Deuterium Nmr Characterization of 1,2-Polybutadiene Local Dynamics in Dilute-Solution. Macromolecules. 1995 ;28:7549-7557.
Zhu HM, Trinh MT, Wang J, Fu YP, Joshi PP, Miyata K, Jin S, Zhu XY. Organic Cations Might Not Be Essential to the Remarkable Properties of Band Edge Carriers in Lead Halide Perovskites. Advanced Materials. 2017 ;29.
Zhu HM, Miyata K, Fu YP, Wang J, Joshi PP, Niesner D, Williams KW, Jin S, Zhu XY. Screening in crystalline liquids protects energetic carriers in hybrid perovskites. Science. 2016 ;353:1409-1413.
Zhou J, Garand E, Eisfeld W, Neumark DM. Slow electron velocity-map imaging spectroscopy of the 1-propynyl radical. Journal of Chemical Physics. 2007 ;127.
Zhou SG, Deng W, Anantharaman TS, Lim A, Dimalanta ET, Wang J, Wu T, Chunhong T, Creighton R, Kile A, et al. A whole-genome shotgun optical map of Yersinia pestis strain KIM. Applied & Environmental Microbiology. 2002 ;68:6321-6331.
Zhou J, Garand E, Neumark DM. Slow electron velocity-map imaging spectroscopy of the C4H- and C4D- anions. Journal of Chemical Physics. 2007 ;127.
Zhou S, Kile A, Bechner M, Place M, Kvikstad E, Deng W, Wei J, Severin J, Runnheim R, Churas C, et al. Single-molecule approach to bacterial genomic comparisons via optical mapping. Journal of Bacteriology. 2004 ;186:7773-7782.
Zhou J, Garand E, Neumark DM. Vibronic structure in C2H and C2D from anion slow electron velocity-map imaging spectroscopy. Journal of Chemical Physics. 2007 ;127.
Zhou MQ, Eun YJ, Guzei IA, Weibel DB. Structure-Activity Studies of Divin: An Inhibitor of Bacterial Cell Division. Acs Medicinal Chemistry Letters. 2013 ;4:880-885.
Zhou SG, Kvikstad E, Kile A, Severin J, Forrest D, Runnheim R, Churas C, Hickman JW, Mackenzie C, Choudhary M, et al. Whole-genome shotgun optical mapping of Rhodobacter sphaeroides strain 2.4.1 and its use for whole-genome shotgun sequence assembly. Genome Research. 2003 ;13:2142-2151.
Zhou D, Metzler RA, Tyliszczak T, Guo JH, Abrecht M, Coppersmith SN, Gilbert PUPA. Assignment of Polarization-Dependent Peaks in Carbon K-Edge Spectra from Biogenic and Geologic Aragonite. Journal of Physical Chemistry B. 2008 ;112:13128-13135.
Zhou SG, Kile A, Kvikstad E, Bechner M, Severin J, Forrest D, Runnheim R, Churas C, Anantharaman TS, Myler P, et al. Shotgun optical mapping of the entire Leishmania major Friedlin genome. Molecular & Biochemical Parasitology. 2004 ;138:97-106.
Zhou SG, Goldstein S, Place M, Bechner M, Patino D, Potamousis K, Ravindran P, Pape L, Rincon G, Hernandez-Ortiz J, et al. A clone-free, single molecule map of the domestic cow (Bos taurus) genome. Bmc Genomics. 2015 ;16.
Zhou S, Wei F, Nguyen J, Bechner M, Potamousis K, Goldstein S, Pape L, Mehan MR, Churas C, Pasternak S, et al. A Single Molecule Scaffold for the Maize Genome. Plos Genetics. 2009 ;5.
Zhou S, Bechner MC, Place M, Churas CP, Pape L, Leong SA, Runnheim R, Forrest DK, Goldstein S, Livny M, et al. Validation of rice genome sequence by optical mapping. Bmc Genomics. 2007 ;8.
Zhou S, Pape L, Schwartz DC. Optical sequencing: acquisition from mapped single-molecule templates. Next-Gener. Genome Sequencing. 2008 :133-151.
Zhou F, Szczech J, Pettes MT, Moore AL, Jin S, Shi L. Determination of transport properties in chromium disilicide nanowires via combined thermoelectric and structural characterizations. Nano Letters. 2007 ;7:1649-1654.
Zhong XF, Hao L, Lu JF, Ye H, Zhang SC, Li LJ. Quantitative analysis of serotonin secreted by human embryonic stem cells-derived serotonergic neurons via pH-mediated online stacking-CE-ESI-MRM. Electrophoresis. 2016 ;37:1027-1030.
Zhong XF, Wang JX, Carlsson C, Okonkwo O, Zetterberg H, Li LJ. A Strategy for Discovery and Verification of Candidate Biomarkers in Cerebrospinal Fluid of Preclinical Alzheimer's Disease. Frontiers in Molecular Neuroscience. 2019 ;11.
Zhong XF, Yu QY, Ma FF, Frost DC, Lu L, Chen ZW, Zetterberg H, Carlsson C, Okonkwo O, Li LJ. HOTMAQ: A Multiplexed Absolute Quantification Method for Targeted Proteomics. Analytical Chemistry. 2019 ;91:2112-2119.
Zhong Z, Yang XT, Wang BH, Yao YF, Guo BH, Yu L, Huang YB, Xu J. Solvent-polymer guest exchange in a carbamazepine inclusion complex: structure, kinetics and implication for guest selection. Crystengcomm. 2019 ;21:2164-2173.
Zhong XF, Chen ZW, Snovida S, Liu Y, Rogers JC, Li LJ. Capillary Electrophoresis-Electrospray Ionization-Mass Spectrometry for Quantitative Analysis of Glycans Labeled with Multiplex Carbonyl-Reactive Tandem Mass Tags. Analytical Chemistry. 2015 ;87:6527-6534.
Zhong XF, Zhang ZC, Jiang S, Li LJ. Recent advances in coupling capillary electrophoresis- based separation techniques to ESI and MALDI-MS. Electrophoresis. 2014 ;35:1214-1225.
Zhi B, Cui Y, Wang SY, Frank BP, Williams DN, Brown RP, Melby ES, Hamers RJ, Rosenzweig Z, Fairbrother DH, et al. Malic Acid Carbon Dots: From Super-resolution Live-Cell Imaging to Highly Efficient Separation. Acs Nano. 2018 ;12:5741-5752.

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