All Faculty and Research Staff Publications

Export 8814 results:
Wang D, Weinstein AB, White PB, Stahl SS. Ligand-Promoted Palladium-Catalyzed Aerobic Oxidation Reactions. Chemical Reviews. 2018 ;118:2636-2679.
Das A, Rahimi A, Ulbrich A, Alherech M, Motagamwala AH, Bhalla A, Sousa LD, Balan V, Dumesic JA, Hegg EL, et al. Lignin Conversion to Low-Molecular-Weight Aromatics via an Aerobic Oxidation-Hydrolysis Sequence: Comparison of Different Lignin Sources. Acs Sustainable Chemistry & Engineering. 2018 ;6:3367-3374.
Buchberger AR, DeLaney K, Johnson J, Li LJ. Mass Spectrometry Imaging: A Review of Emerging Advancements and Future Insights. Analytical Chemistry. 2018 ;90:240-265.
Wysoczynski-Horita CL, Boursier ME, Hill R, Hansen K, Blackwell HE, Churchill MEA. Mechanism of agonism and antagonism of the Pseudomonas aeruginosa quorum sensing regulator QscR with non-native ligands. Molecular MicrobiologyMolecular Microbiology. 2018 ;108:240-257.
Mannel DS, King J, Preger Y, Ahmed MS, Root TW, Stahl SS. Mechanistic Insights into Aerobic Oxidative Methyl Esterification of Primary Alcohols with Heterogeneous PdBiTe Catalystsy. Acs Catalysis. 2018 ;8:1038-1047.
Hermes ED, Janes AN, Schmidt JR. Mechanistic Insights into Solution-Phase Oxidative Esterification of Primary Alcohols on Pd(111) from First-Principles Microkinetic Modeling. ACS Catalysis. 2018 ;8:272-282.
Yang ZL, Choi H, Weisshaar JC. Melittin-Induced Permeabilization, Re-sealing, and Re-permeabilization of E-coli Membranes. Biophysical Journal. 2018 ;114:368-379.
Vakirlis N, Hebert AS, Opulente DA, Achaz G, Hittinger CT, Fischer G, Coon JJ, Lafontaine I. A Molecular Portrait of De Novo Genes in Yeasts. Molecular Biology and Evolution. 2018 ;35:631-645.
Lapointe CP, Stefely JA, Jochem A, Hutchins PD, Wilson GM, Kwiecien NW, Coon JJ, Wickens M, Pagliarini DJ. Multi-omics Reveal Specific Targets of the RNA-Binding Protein Puf3p and Its Orchestration of Mitochondrial Biogenesis. Cell Systems. 2018 ;6:125-+.
Overmyer KA, Tyanova S, Hebert AS, Westphall MS, Cox J, Coon JJ. Multiplexed proteome analysis with neutron-encoded stable isotope labeling in cells and mice. Nature Protocols. 2018 ;13:293-306.
Kim SH, Stiles SG, Feichtmeier JM, Ramesh N, Zhan L, Scalf MA, Smith LM, U. Pandey B, Tibbetts RS. Mutation-dependent aggregation and toxicity in a Drosophila model for UBQLN2-associated ALS. Human Molecular Genetics. 2018 ;27:322-337.
Yang N, Anapindi KDB, Rubakhin SS, Wei PL, Yu Q, Li LJ, Kenny PJ, Sweedler JV. Neuropeptidomics of the Rat Habenular Nuclei. Journal of Proteome Research. 2018 ;17:1463-1473.
Van Vleet MJ, Misquitta AJ, Schmidt JR. New Angles on Standard Force Fields: Toward a General Approach for Treating Atomic-Level Anisotropy. Journal of Chemical Theory and Computation. 2018 ;14:739-758.
DeLaney K, Buchberger AR, Atkinson L, Grunder S, Mousley A, Li LJ. New techniques, applications and perspectives in neuropeptide research. Journal of Experimental Biology. 2018 ;221.
Wei LM, Gregorich ZR, Lin ZQ, Cai WX, Jin YT, McKiernan SH, McIlwain S, Aiken JM, Moss RL, Diffee GM, et al. Novel Sarcopenia-related Alterations in Sarcomeric Protein Post-translational Modifications (PTMs) in Skeletal Muscles Identified by Top-down Proteomics. Molecular & Cellular Proteomics. 2018 ;17:148-159.
Kontur WS, Bingman CA, Olmsted CN, Wassarman DR, Ulbrich A, Gall DL, Smith RW, Yusko LM, Fox BG, Noguera DR, et al. Novosphingobium aromaticivorans uses a Nu-class glutathione S-transferase as a glutathione lyase in breaking the beta-aryl ether bond of lignin. Journal of Biological Chemistry. 2018 ;293:4955-4968.
Robinson ME, Ng JD, Zhang HL, Buchman JT, Shenderova OA, Haynes CL, Ma ZQ, Goldsmith RH, Hamers RJ. Optically Detected Magnetic Resonance for Selective Imaging of Diamond Nanoparticles. Analytical Chemistry. 2018 ;90:769-776.
Fredrickson DC. Parallels in Structural Chemistry between the Molecular and Metallic Realms Revealed by Complex Intermetallic Phases. Accounts of Chemical Research. 2018 ;51:248-257.
Su Y, Xu J, Shi Q, Yu L, Cai T. Polymorphism of griseofulvin: concomitant crystallization from the melt and a single crystal structure of a metastable polymorph with anomalously large thermal expansion. Chemical Communications. 2018 ;54:358-361.
Leduc RD, Schwammle V, Shortreed MR, Cesnik AJ, Solntsev SK, Shaw JB, Martin MJ, Vizcaino JA, Alpi E, Danis P, et al. ProForma: A Standard Proteoform Notation. Journal of Proteome Research. 2018 ;17:1321-1325.
Cesnik AJ, Shortreed MR, Schaffer LV, Knoener RA, Frey BL, Scalf M, Solntsev SK, Dai YX, Gasch AP, Smith LM. Proteoform Suite: Software for Constructing, Quantifying, and Visualizing Proteoform Families. Journal of Proteome Research. 2018 ;17:568-578.
Smith LM, Kelleher NL. Proteoforms as the next proteomics currency. Science. 2018 ;359:1106-1107.
Cheng X, Shkel IA, Molzahn C, Lambert D, Karim R, Record MT. Quantifying Interactions of Nucleobase Atoms with Model Compounds for the Peptide Backbone and Glutamine and Asparagine Side Chains in Water. Biochemistry. 2018 ;57:2227-2237.
Stallcop LE, Alvarez-Garcia YR, Reyes-Ramos AM, Ramos-Cruz KP, Morgan MM, Shi YT, Li LJ, Beebe DJ, Domenech M, Warrick JW. Razor-printed sticker microdevices for cell-based applications. Lab on a Chip. 2018 ;18:451-462.
Chen ZW, Glover MS, Li LJ. Recent advances in ion mobility-mass spectrometry for improved structural characterization of glycans and glycoconjugates. Current Opinion in Chemical Biology. 2018 ;42:1-8.
Voss JM, Fischer KC, Garand E. Revealing the structure of isolated peptides: IR-IR predissociation spectroscopy of protonated triglycine isomers. Journal of Molecular Spectroscopy. 2018 ;347:28-34.
Esselman B, Hill NJ. Revisiting the Bleach Oxidation of 4-tert-Butylcyclohexanol. The Chemical Educator. 2018 ;23:23-27.
Riley NM, Coon JJ. The Role of Electron Transfer Dissociation in Modern Proteomics. Analytical Chemistry. 2018 ;90:40-64.
Rengifo E, Gomez S, Arce JC, Weinhold F, Restrepo A. The role of hyperconjugation in the unusual conformation of thymine: A natural bond orbital analysis. Computational and Theoretical Chemistry. 2018 ;1130:58-62.
Bertram TH, Cochran RE, Grassian VH, Stone EA. Sea spray aerosol chemical composition: elemental and molecular mimics for laboratory studies of heterogeneous and multiphase reactions. Chemical Society Reviews. 2018 ;47:2374-2400.
Lennox AJJ, Nutting JE, Stahl SS. Selective electrochemical generation of benzylic radicals enabled by ferrocene-based electron-transfer mediators. Chemical Science. 2018 ;9:356-361.
Riley NM, Westphall MS, Coon JJ. Sequencing Larger Intact Proteins (30-70 kDa) with Activated Ion Electron Transfer Dissociation. Journal of the American Society for Mass Spectrometry. 2018 ;29:140-149.
Mustafi M, Weisshaar JC. Simultaneous Binding of Multiple EF-Tu Copies to Translating Ribosomes in Live Escherichia coli. Mbio. 2018 ;9.
Maj M, Lomont JP, Rich KL, Alperstein AM, Zanni MT. Site-specific detection of protein secondary structure using 2D IR dihedral indexing: a proposed assembly mechanism of oligomeric hIAPP. Chemical Science. 2018 ;9:463-474.
Santos TMA, Lammers MG, Zhou MQ, Sparks IL, Rajendran M, Fang D, De Jesus CLY, Carneiro GFR, Cui Q, Weibel DB. Small Molecule Chelators Reveal That Iron Starvation Inhibits Late Stages of Bacterial Cytokinesis. ACS Chemical Biology. 2018 ;13:235-246.
Lomont JP, Rich KL, Maj M, Ho JJ, Ostrander JS, Zanni MT. Spectroscopic Signature for Stable beta-Amyloid Fibrils versus beta-Sheet-Rich Oligomers. Journal of Physical Chemistry B. 2018 ;122:144-153.
Stilwell MD, Cao MY, Goodrich-Blair H, Weibel DB. Studying the Symbiotic Bacterium Xenorhabdus nematophila in Individual, Living Steinernema carpocapsae Nematodes Using Microfluidic Systems. Msphere. 2018 ;3.
Wei W, Balamurugan A, Dwyer JH, Gopalan P. Substrate-Independent Approach to Dense Cleavable Polymer Brushes by Nitroxide-Mediated Polymerization. Acs Macro Letters. 2018 ;7:100-104.
He JY, Burt SP, Ball M, Zhao DT, Hermans I, Dumesic JA, Huber GW. Synthesis of 1,6-Hexanediol from Cellulose Derived Tetrahydrofuran-Dimethanol with Pt-WOx/TiO2 Catalysts. Acs Catalysis. 2018 ;8:1427-1439.
Minelli M, Hart-Cooper W, Sinnwell JG, Blumberg DT, Guzei IA, Spencer LC, Vazquez JPS, Peralta AS, Torres MS. Synthesis, structure, and characterization of molybdenum(VI) imido complexes with N-salicylidene-2-aminothiophenol. Polyhedron. 2018 ;146:26-34.
Chen BM, Zhong XF, Feng Y, Snovida S, Xu M, Rogers J, Li LJ. Targeted MultiNotch MS3 Approach for Relative Quantification of N-Glycans Using Multiplexed Carbonyl-Reactive Isobaric Tags. Analytical Chemistry. 2018 ;90:1129-1135.
Weinhold F. Theoretical Prediction of Robust Second-Row Oxyanion Clusters in the Metastable Domain of Antielectrostatic Hydrogen Bonding. Inorganic Chemistry. 2018 ;57:2035-2044.
Chen BF, Brown KA, Lin ZQ, Ge Y. Top-Down Proteomics: Ready for Prime Time?. Analytical Chemistry. 2018 ;90:110-127.
Seok SH, Ma ZX, Feltenberger JB, Chen HB, Chen H, Scarlett C, Lin ZQ, Satyshur KA, Cortopassi M, Jefcoate CR, et al. Trace derivatives of kynurenine potently activate the aryl hydrocarbon receptor (AHR). Journal of Biological Chemistry. 2018 ;293:1994-2005.
Zhu M, Yu L. Trans-cis isomerization energies of azopyridines: a calorimetric and computational study. Journal of Thermal Analysis and Calorimetry. 2018 ;132:463-469.
Petti MK, Lomont JP, Maj M, Zanni MT. Two-Dimensional Spectroscopy Is Being Used to Address Core Scientific Questions in Biology and Materials Science. Journal of Physical Chemistry B. 2018 ;122:1771-1780.
Millikin RJ, Solntsev SK, Shortreed MR, Smith LM. Ultrafast Peptide Label-Free Quantification with FlashLFQ. Journal of Proteome Research. 2018 ;17:386-391.
Pan DX, Fu YP, Chen J, Czech KJ, Wright JC, Jin S. Visualization and Studies of Ion-Diffusion Kinetics in Cesium Lead Bromide Perovskite Nanowires. Nano Letters. 2018 ;18:1807-1813.
Tammisetti RD, Kosilkin IV, Guzei IA, Khrustalev VN, Dalton L, Timofeeva TV. Z/E-Isomerism of 3- 4-(dimethylamino)phenyl -2-(2,4,6-tribromophenyl)acrylonitrile: crystal structures and secondary intermolecular interactions. Acta Crystallographica Section C-Structural Chemistry. 2018 ;74:69-+.