All Department Publications

Found 330 results
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2012
Sturm R, Sheynkman G, Booth C, Smith LM, Pedersen JA, Li L. Absolute quantification of prion protein (90-231) using stable isotope-labeled chymotryptic peptide standards in a LC-MRM AQUA workflow. J Am Soc Mass Spectrom. 2012;23(9):1522-33.
Ischay MA, Yoon TP. Accessing the Synthetic Chemistry of Radical Ions. European Journal of Organic Chemistry. 2012:3359-3372.
Hansen DF, Westler WM, Kunze MBA, Markley JL, Weinhold F, Led JJ. Accurate Structure and Dynamics of the Metal-Site of Paramagnetic Metalloproteins from NMR Parameters Using Natural Bond Orbitals. Journal of the American Chemical Society. 2012;134:4670-4682.
Aytar BS, Muller JPE, Golan S, Hata S, Takahashi H, Kondo Y, Talmon Y, Abbott NL, Lynn DM. Addition of ascorbic acid to the extracellular environment activates lipoplexes of a ferrocenyl lipid and promotes cell transfection. Journal of Controlled Release. 2012;157:249-259.
Hill NJ, Hoover JM, Stahl SS. Aerobic Alcohol Oxidation Using a Copper(I)/TEMPO Catalyst System: A Green, Catalytic Oxidation Reaction for the Undergraduate Organic Chemistry Laboratory. Journal of Chemical Education. 2012:null.
Lin HC, Goldstein S, Mendelowitz L, Zhou SG, Wetzel J, Schwartz DC, Pop M. AGORA: Assembly Guided by Optical Restriction Alignment. Bmc Bioinformatics. 2012;13.
Rigoli JW, Moyer SA, Pearce SD, Schomaker JM. alpha,beta-Unsaturated imines via Ru-catalyzed coupling of allylic alcohols and amines. Organic & Biomolecular Chemistry. 2012;10:1746-1749.
Thomas GB, Lipscomb CE, Mahanthappa MK. Amino acid vinyl esters: a new monomer palette for degradable polycationic materials. Polymer Chemistry. 2012;3:741-750.
Oliveira SM, Zhang YH, Solis RS, Isackson H, Bellahcene M, Yavari A, Pinter K, Davies JK, Ge Y, Ashrafian H, et al. AMP-Activated Protein Kinase Phosphorylates Cardiac Troponin I and Alters Contractility of Murine Ventricular Myocytes. Circulation Research. 2012;110:1192-1201.
McAlister GC, Russell JD, Rumachik NG, Hebert AS, Syka JEP, Geer LY, Westphall MS, Pagliarini DJ, Coon JJ. Analysis of the Acidic Proteome with Negative Electron-Transfer Dissociation Mass Spectrometry. Analytical Chemistry. 2012;84:2875-2882.
Lam RSK, Metzler RA, Gilbert P, Beniash E. Anisotropy of Chemical Bonds in Collagen Molecules Studied by X-ray Absorption Near-Edge Structure (XANES) Spectroscopy. ACS Chemical Biology. 2012;7:476-480.
Olson IC, Gilbert P. Aragonite crystal orientation in mollusk shell nacre may depend on temperature. The angle spread of crystalline aragonite tablets records the water temperature at which nacre was deposited by Pinctada margaritifera. Faraday Discuss. 2012;159:421-432.
Tang Y, Yang JH, Liu J, Wang CC, Lv MC, Wu YB, Yu XL, Ko CH, Hsung RP. ASSEMBLY OF THE SOUTHERN MACROCYCLIC HALF OF (+)-SPIRASTRELLOLIDE A THROUGH CYCLIC ACETAL TETHERED RING-CLOSING METATHESIS AND 1,3-ANTI-MUKAIYAMA-ALDOL. Heterocycles. 2012;86:565-598.
Li Manni G, Dzubak AL, Mulla A, Brogden DW, Berry JF, Gagliardi L. Assessing Metal–Metal Multiple Bonds in Cr–Cr, Mo–Mo, and W–W Compounds and a Hypothetical U–U Compound: A Quantum Chemical Study Comparing DFT and Multireference Methods. Chemistry – A European Journal. 2012;18:1737–1749.
Wong ML, Guzei IA, Kiessling LL. An Asymmetric Synthesis of L-Pyrrolysine. Organic Letters. 2012;14:1378-1381.
Yu G, Keutsch FN. Atmospheric organic-phase photo-sensitized epoxidation of alkenes by α-dicarbonyls. Atmospheric Chemistry and Physics Discussions [Internet]. 2012;12:15115–15138. Available from: http://www.atmos-chem-phys-discuss.net/12/15115/2012/
Park S, Zhu X, Yethiraj A. Atomistic Simulations of Dilute Polyelectrolyte Solutions. Journal of Physical Chemistry B. 2012;116:4319-4327.
Stacy DM, Welsh MA, Rather PN, Blackwell HE, Jg JOf Bacteri. Attenuation of Quorum Sensing in the Pathogen Acinetobacter baumannii Using Non-native N-Acyl Homoserine Lactones. ACS Chemical Biology. 2012;7:1719-1728.
Stacy DM, Welsh MA, Rather PN, Blackwell HE. Attenuation of Quorum Sensing in the Pathogen Acinetobacter baumannii Using Non-native N-Acyl Homoserine Lactones. ACS Chemical Biology [Internet]. 2012;7:1719-1728. Available from: http://pubs.acs.org/doi/abs/10.1021/cb300351x
Dong XT, Sumandea CA, Chen YC, Garcia-Cazarin ML, Zhang J, Balke CW, Sumandea MP, Ge Y. Augmented Phosphorylation of Cardiac Troponin I in Hypertensive Heart Failure. Journal of Biological Chemistry. 2012;287:848-857.
Buck ME, Lynn DM. Azlactone-functionalized polymers as reactive platforms for the design of advanced materials: Progress in the last ten years. Polym. Chem. 2012;3:66-80.
2011
Zhao L-X, Huang S-X, Tang S-K, Jiang C-L, Duan Y, Beutler JA, Henrich CJ, McMahon JB, Schmid T, Blees JS, et al. Actinopolysporins A-C and Tubercidin as a Pdcd4 Stabilizer from the Halophilic Actinomycete Actinopolyspora erythraea YIM 90600. Journal of Natural Products. 2011;74:1990-1995.
Xiong W, Laaser JE, Mehlenbacher RD, Zanni MT. Adding a dimension to the infrared spectra of interfaces using heterodyne detected 2D sum-frequency generation (HD 2D SFG) spectroscopy. Proceedings of the National Academy of Sciences [Internet]. 2011;108:20902-20907. Available from: http://www.pnas.org/content/108/52/20902.abstract
Wang J, Ye H, Zhang Z, Xiang F, Girdaukas G, Li L. Advancing Matrix-Assisted Laser Desorption/Ionization-Mass Spectrometric Imaging for Capillary Electrophoresis Analysis of Peptides. Analytical Chemistry. 2011;83:3462-3469.
Boralsky LA, Marston D, Grigg DR, Hershberger JC, Schomaker JM. Allene Functionalization via Bicyclic Methylene Aziridines. Organic Letters. 2011;13:1924-1927.
Galloway MM, Loza CL, Chhabra PS, Chan AWH, Yee LD, Seinfeld JH, Keutsch FN. Analysis of photochemical and dark glyoxal uptake: Implications for SOA formation. Geophysical Research Letters. 2011;38 L17811 L17811.
Dawson KJ, Zhu L, Yu L, Ediger MD. Anisotropic Structure and Transformation Kinetics of Vapor-Deposited Indomethacin Glasses. Journal of Physical Chemistry B. 2011;115:455-463.
Goyal P, Elstner M, Cui Q. Application of the SCC-DFTB Method to Neutral and Protonated Water Clusters and Bulk Water. Journal of Physical Chemistry B. 2011;115:6790-6805.
Sundlass NK, Raines RT. Arginine Residues Are More Effective than Lysine Residues in Eliciting the Cellular Uptake of Onconase. Biochemistry. 2011;50:10293-10299.
Al-Rashid ZF, Hsung RP. (+)-Arisugacin A-Computational evidence of a dual binding site covalent inhibitor of acetylcholinesterase. Bioorganic & Medicinal Chemistry Letters. 2011;21:2687-2691.
Long AKM, Timmer GH, Pap JS, Snyder JL, Yu RP, Berry JF. Aryl C-H Amination by Diruthenium Nitrides in the Solid State and in Solution at Room Temperature: Experimental and Computational Study of the Reaction Mechanism. Journal of the American Chemical Society. 2011;133:13138-13150.
Buchanan GS, Dai HF, Hsung RP, Gerasyuto AI, Scheinebeck CM. Asymmetric Aza- 3+3 Annulation in the Synthesis of Indolizidines: An Unexpected Reversal of Regiochemistry. Organic Letters. 2011;13:4402-4405.
Gonzalez-Moreno R, Cook PL, Zegkinoglou I, Liu X, Johnson PS, Yang W, Ruther RE, Hamers RJ, Tena-Zaera R, Himpsel FJ, et al. Attachment of Protoporphyrin Dyes to Nanostructured ZnO Surfaces: Characterization by Near Edge X-ray Absorption Fine Structure Spectroscopy. Journal of Physical Chemistry C. 2011;115:18195-18201.
Palmer AG, Streng E, Blackwell HE. Attenuation of Virulence in Pathogenic Bacteria Using Synthetic Quorum-Sensing Modulators under Native Conditions on Plant Hosts. ACS Chemical Biology [Internet]. 2011;6:1348-1356. Available from: http://pubs.acs.org/doi/abs/10.1021/cb200298g
Kuhn P, Chumanov R, Wang YD, Ge Y, Burgess RR, Xu W. Automethylation of CARM1 allows coupling of transcription and mRNA splicing. Nucleic Acids Research. 2011;39:2717-2726.
2010
Shoulders MD, Kotch FW, Choudhary A, Guzei IA, Raines RT. The Aberrance of the 4S Diastereomer of 4-Hydroxyproline. Journal of the American Chemical Society. 2010;132:10857-10865.
Ledvina AR, Beauchene NA, McAlister GC, Syka JEP, Schwartz JC, Griep-Raming J, Westphall MS, Coon JJ. Activated-Ion Electron Transfer Dissociation Improves the Ability of Electron Transfer Dissociation to Identify Peptides in a Complex Mixture. Analytical Chemistry. 2010;82:10068-10074.
Kalia J, Raines RT. Advances in Bioconjugation. Current Organic Chemistry. 2010;14:138-147.
Izawa Y, Stahl SS. Aerobic Oxidative Coupling of o-Xylene: Discovery of 2-Fluoropyridine as a Ligand to Support Selective Pd-Catalyzed C-H Functionalization. Advanced Synthesis & Catalysis. 2010;352:3223-3229.
Book AJ, Gladman NP, Lee S-S, Scalf M, Smith LM, Vierstra RD. Affinity purification of the Arabidopsis 26 S proteasome reveals a diverse array of plant proteolytic complexes. J Biol Chem. 2010;285(33):25554-69.
Kulevich SE, Frey BL, Kreitinger G, Smith LM. Alkylating tryptic peptides to enhance electrospray ionization mass spectrometry analysis. Anal Chem. 2010;82(24):10135-42.
Campbell AN, White PB, Guzei IA, Stahl SS. Allylic C-H Acetoxylation with a 4,5-Diazafluorenone-Ligated Palladium Catalyst: A Ligand-Based Strategy To Achieve Aerobic Catalytic Turnover. Journal of the American Chemical Society. 2010;132:15116-15119.
McAlister GC, Phanstiel D, Wenger CD, Lee VM, Coon JJ. Analysis of Tandem Mass Spectra by FTMS for Improved Large-Scale Proteomics with Superior Protein Quantification. Analytical Chemistry. 2010;82:316-322.
Yen TA, Garand E, Shreve AT, Neumark DM. Anion Photoelectron Spectroscopy of C3N- and C5N. Journal of Physical Chemistry A. 2010;114:3215-3220.
Rutkoski TJ, Kink JA, Strong LE, Schilling CI, Raines RT. Antitumor Activity of Ribonuclease Multimers Created by Site-Specific Covalent Tethering. Bioconjugate Chemistry. 2010;21:1691-1702.
Long AKM, Yu RP, Timmer GH, Berry JF. Aryl C-H Bond Amination by an Electrophilic Diruthenium Nitride. Journal of the American Chemical Society. 2010;132:12228-12230.
Metzler RA, Tribello GA, Parrinello M, Gilbert P. Asprich Peptides Are Occluded in Calcite and Permanently Disorder Biomineral Crystals. Journal of the American Chemical Society. 2010;132:11585-11591.

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