All Department Publications

Found 18 results
Author Title Type [ Year(Asc)]
Filters: Author is De Pablo, Juan J.  [Clear All Filters]
2012
Woys AM, Almeida AM, Wang L, Chiu C-C, McGovern M, De Pablo JJ, Skinner JL, Gellman SH, Zanni MT. Parallel β-Sheet Vibrational Couplings Revealed by 2D IR Spectroscopy of an Isotopically Labeled Macrocycle: Quantitative Benchmark for the Interpretation of Amyloid and Protein Infrared Spectra. J Am Chem Soc. 2012;134(46):19118-28.
2011
Wang L, Middleton CT, Singh S, Reddy AS, Woys AM, Strasfeld DB, Marek P, Raleigh DP, De Pablo JJ, Zanni MT, et al. 2DIR Spectroscopy of Human Amylin Fibrils Reflects Stable beta-Sheet Structure. Journal of the American Chemical Society. 2011;133:16062-16071.
Kim Y, Kim KS, Kounovsky KL, Chang R, Jung GY, De Pablo JJ, Jo K, Schwartz DC. Nanochannel confinement: DNA stretch approaching full contour length. Lab on a Chip. 2011;11:1721-1729.
2010
Woys AM, Lin Y-S, Reddy AS, Xiong W, De Pablo JJ, Skinner JL, Zanni MT. 2D IR Line Shapes Probe Ovispirin Peptide Conformation and Depth in Lipid Bilayers. Journal of the American Chemical Society. 2010;132:2832-2838.
Kang H, Detcheverry F, Stuen KO, Craig GSW, De Pablo JJ, Gopalan P, Nealey PF. Shape control and density multiplication of cylinder-forming ternary block copolymer-homopolymer blend thin films on chemical patterns. Journal of Vacuum Science & Technology B. 2010;28:C6B24-C6B29.
Reddy AS, Wang L, Lin Y-S, Ling Y, Chopra M, Zanni MT, Skinner JL, De Pablo JJ. Solution Structures of Rat Amylin Peptide: Simulation, Theory, and Experiment. Biophysical Journal. 2010;98:443-451.
Reddy AS, Wang L, Singh S, Ling YL, Buchanan L, Zanni MT, Skinner JL, De Pablo JJ. Stable and Metastable States of Human Amylin in Solution. Biophysical Journal. 2010;99:2208-2216.
2008
Miller CA, Hernandez-Ortiz JP, Abbott NL, Gellman SH, De Pablo JJ. Dipole-induced self-assembly of helical beta-peptides. Journal of Chemical Physics. 2008;129.
lzmitli A, Schwartz DC, Graham MD, De Pablo JJ. The effect of hydrodynamic interactions on the dynamics of DNA translocation through pores. Journal of Chemical Physics. 2008;128.
Kang H, Detcheverry FA, Mangham AN, Stoykovich MP, Daoulas KC, Hamers RJ, Mueller M, De Pablo JJ, Nealey PF. Hierarchical assembly of nanoparticle superstructures from block copolymer-nanoparticle composites. Physical Review Letters. 2008;100.
Miller CA, Gellman SH, Abbott NL, De Pablo JJ. Mechanical stability of helical beta-peptides and a comparison of explicit and implicit solvent models. Biophysical Journal. 2008;95:3123-3136.
2007
Knotts TA, Rathore N, Schwartz DC, De Pablo JJ. A coarse grain model for DNA. Journal of Chemical Physics. 2007;126.
Riggleman RA, Lee H-N, Ediger MD, De Pablo JJ. Free volume and finite-size effects in a polymer glass under stress. Physical Review Letters. 2007;99.
Jo K, Dhingra DM, Odijk T, De Pablo JJ, Graham MD, Runnheim R, Forrest D, Schwartz DC. A single-molecule barcoding system using nanoslits for DNA analysis. Proceedings of the National Academy of Sciences of the United States of America. 2007;104:2673-2678.
2004
Dimalanta ET, Lim A, Runnheim R, Lamers C, Churas C, Forrest DK, De Pablo JJ, Graham MD, Coppersmith SN, Goldstein S, et al. A microfluidic system for large DNA molecule arrays. Anal Chem. 2004;76(18):5293-301.
Jendrejack RM, Schwartz DC, De Pablo JJ, Graham MD. Shear-induced migration in flowing polymer solutions: simulation of long-chain DNA in microchannels [corrected]. J Chem Phys. 2004;120(5):2513-29.
2003
Jendrejack RM, Schwartz DC, Graham MD, De Pablo JJ. Effect of confinement on DNA dynamics in microfluidic devices. The Journal of Chemical Physics. 2003;119:1165-1173.
2002
Budzien J, Raphael C, Ediger MD, De Pablo JJ. Segmental dynamics in a blend of alkanes: Nuclear magnetic resonance experiments and molecular dynamics simulation. The Journal of Chemical Physics [Internet]. 2002;116:8209-8217. Available from: http://link.aip.org/link/?JCP/116/8209/1

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