All Department Publications

Found 23 results
Author [ Title(Desc)] Type Year
Filters: Author is de Pablo, J. J.  [Clear All Filters]
A B C D E F G H I J K L M N O P Q R S T U V W X Y Z 
A
Miller CA, Gellman SH, Abbott NL, de Pablo JJ. Association of Helical beta-Peptides and their Aggregation Behavior from the Potential of Mean Force in Explicit Solvent. Biophysical Journal. 2009;96:4349-4362.
C
Liu CC, Ramirez-Hernandez A, Han E, Craig GSW, Tada Y, Yoshida H, Kang HM, Ji SX, Gopalan P, de Pablo JJ, et al. Chemical Patterns for Directed Self-Assembly of Lamellae-Forming Block Copolymers with Density Multiplication of Features. Macromolecules. 2013;46:1415-1424.
D
Lee HN, Riggleman RA, de Pablo JJ, Ediger MD. Deformation-Induced Mobility in Polymer Glasses during Multistep Creep Experiments and Simulations. Macromolecules. 2009;42:4328-4336.
Jendrejack RM, Dimalanta ET, Schwartz DC, Graham MD, de Pablo JJ. DNA dynamics in a microchannel - art. no. 038102. Physical Review Letters. 2003;9103:8102.
Chen Y-L, Graham MD, de Pablo JJ, Jo K, Schwartz DC. DNA Molecules in Microfluidic Oscillatory Flow. Macromolecules. 2005;38(15):6680-6687.
E
Jendrejack RM, Schwartz DC, Graham MD, de Pablo JJ. Effect of confinement on DNA dynamics in microfluidic devices. Journal of Chemical Physics. 2003;119:1165-1173.
Jo K, Chen YL, de Pablo JJ, Schwartz DC. Elongation and migration of single DNA molecules in microchannels using oscillatory shear flows. Lab on a Chip. 2009;9:2348-2355.
Malshe R, Ediger MD, Yu L, de Pablo JJ. Evolution of glassy gratings with variable aspect ratios under surface diffusion. Journal of Chemical Physics. 2011;134.
H
Riggleman RA, Lee HN, Ediger MD, de Pablo JJ. Heterogeneous dynamics during deformation of a polymer glass. Soft Matter. 2010;6:287-291.
Kang H, Detcheverry FA, Mangham AN, Stoykovich MP, Daoulas KC, Hamers RJ, Muller M, de Pablo JJ, Nealey PF. Hierarchical assembly of nanoparticle superstructures from block copolymer-nanoparticle composites. Physical Review Letters [Internet]. 2008;100. Available from: <Go to ISI>://000254940900072
M
Sambriski EJ, Schwartz DC, de Pablo JJ. A Mesoscale Model of DNA and Its Renaturation. Biophysical Journal. 2009;96:1675-1690.
Dimalanta ET, Lim A, Runnheim R, Lamers C, Churas C, Forrest DK, de Pablo JJ, Graham MD, Coppersmith SN, Goldstein S, et al. A microfluidic system for large DNA molecule arrays. Analytical ChemistryAnalytical Chemistry. 2004;76:5293-5301.
Yu H, Jo K, Kounovsky KL, de Pablo JJ, Schwartz DC. Molecular Propulsion: Chemical Sensing and Chemotaxis of DNA Driven by RNA Polymerase. Journal of the American Chemical Society. 2009;131:5722-+.
P
Woys AM, Almeida AM, Wang L, Chiu CC, McGovern M, de Pablo JJ, Skinner JL, Gellman SH, Zanni MT. Parallel beta-Sheet Vibrational Couplings Revealed by 2D IR Spectroscopy of an Isotopically Labeled Macrocycle: Quantitative Benchmark for the Interpretation of Amyloid and Protein Infrared Spectra. Journal of the American Chemical Society. 2012;134:19118-19128.
R
Khare R, de Pablo JJ, Yethiraj A. Rheology of confined polymer melts. Macromolecules. 1996;29:7910-7918.
S
Budzien J, Raphael C, Ediger MD, de Pablo JJ. Segmental dynamics in a blend of alkanes: Nuclear magnetic resonance experiments and molecular dynamics simulation. Journal of Chemical Physics. 2002;116:8209-8217.
Jendrejack RM, Schwartz DC, de Pablo JJ, Graham MD. Shear-induced migration in flowing polymer solutions: Simulation of long-chain DNA in microchannels (vol 120, pg 2513, 2004). Journal of Chemical Physics. 2004;120:6315.
Jendrejack RM, Schwartz DC, de Pablo JJ, Graham MD. Shear-induced migration in flowing polymer solutions: Simulation of long-chain deoxyribose nucleic acid in microchannels. Journal of Chemical Physics. 2004;120:2513-2529.
T
Rathore N, Gellman SH, de Pablo JJ. Thermodynamic stability of beta-peptide helices and the role of cyclic residues. Biophysical Journal. 2006;91:3425-3435.
Middleton CT, Marek P, Cao P, Chiu CC, Singh S, Woys AM, de Pablo JJ, Raleigh DP, Zanni MT. Two-dimensional infrared spectroscopy reveals the complex behaviour of an amyloid fibril inhibitor. Nature Chemistry. 2012;4:355-360.
U
Singh S, Ediger MD, de Pablo JJ. Ultrastable glasses from in silico vapour deposition. Nature Materials. 2013;12:139-144.
Sambriski EJ, Schwartz DC, de Pablo JJ. Uncovering pathways in DNA oligonucleotide hybridization via transition state analysis (vol 106, pg 18125, 2009). Proceedings of the National Academy of Sciences of the United States of America. 2009;106:21007-21007.
Sambriski EJ, Schwartz DC, de Pablo JJ. Uncovering pathways in DNA oligonucleotide hybridization via transition state analysis. Proceedings of the National Academy of Sciences of the United States of America. 2009;106:18125-18130.

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