All Department Publications

Found 152 results
Author Title Type [ Year(Asc)]
Filters: Author is Skinner, J. L.  [Clear All Filters]
2013
Tainter CJ, Ni Y, Shi L, Skinner JL, Mednikov EG, Dahl LF, Peterson AC, Russell JD, Bailey DJ, Westphall MS, et al. Hydrogen Bonding and OH-Stretch Spectroscopy in Water: Hexamer (Cage), Liquid Surface, Liquid, and IceHow innocent is thallium(I)? Corrected formulations of Tl2Pd14(CO)(9)(PMe3)(11) PF6 (2) and TlPd9(CO)(9)(PPh3)(6) PF6 clusters previously reported as cor. Journal of Physical Chemistry Letters. 2013;4:12-17.
Tan YZ, Jin S, Hamers RJ, Tainter CJ, Ni Y, Shi L, Skinner JL, Mednikov EG, Dahl LF, Peterson AC, et al. Influence of Hole-Sequestering Ligands on the Photostability of CdSe Quantum DotsHydrogen Bonding and OH-Stretch Spectroscopy in Water: Hexamer (Cage), Liquid Surface, Liquid, and IceHow innocent is thallium(I)? Corrected formulations of Tl2Pd14(CO)(9)(PM. Journal of Physical Chemistry C. 2013;117:313-320.
2012
Woys AM, Almeida AM, Wang L, Chiu CC, McGovern M, de Pablo JJ, Skinner JL, Gellman SH, Zanni MT. Parallel beta-Sheet Vibrational Couplings Revealed by 2D IR Spectroscopy of an Isotopically Labeled Macrocycle: Quantitative Benchmark for the Interpretation of Amyloid and Protein Infrared Spectra. Journal of the American Chemical Society. 2012;134:19118-19128.
Woys AM, Almeida AM, Wang L, Chiu C-C, McGovern M, De Pablo JJ, Skinner JL, Gellman SH, Zanni MT. Parallel β-Sheet Vibrational Couplings Revealed by 2D IR Spectroscopy of an Isotopically Labeled Macrocycle: Quantitative Benchmark for the Interpretation of Amyloid and Protein Infrared Spectra. J Am Chem Soc. 2012;134(46):19118-28.
Wang L, Skinner JL. Thermally Induced Protein Unfolding Probed by Isotope-Edited IR Spectroscopy. Journal of Physical Chemistry B. 2012;116:9627-9634.
Skinner JL, Pieniazek PA, Gruenbaum SM. Vibrational Spectroscopy of Water at Interfaces. Accounts of Chemical Research. 2012;45:93-100.
Tainter CJ, Skinner JL. The water hexamer: Three-body interactions, structures, energetics, and OH-stretch spectroscopy at finite temperature. Journal of Chemical Physics. 2012;137:104304.
2011
Wang L, Middleton CT, Singh S, Reddy AS, Woys AM, Strasfeld DB, Marek P, Raleigh DP, De Pablo JJ, Zanni MT, et al. 2DIR Spectroscopy of Human Amylin Fibrils Reflects Stable beta-Sheet Structure. Journal of the American Chemical Society. 2011;133:16062-16071.
Nicodemus RA, Corcelli SA, Skinner JL, Tokmakoff A. Collective Hydrogen Bond Reorganization in Water Studied with Temperature-Dependent Ultrafast Infrared Spectroscopy. Journal of Physical Chemistry B. 2011;115:5604-5616.
Wang L, Middleton CT, Zanni MT, Skinner JL. Development and Validation of Transferable Amide I Vibrational Frequency Maps for Peptides. Journal of Physical Chemistry B. 2011;115:3713-3724.
Stiopkin IV, Weeraman C, Pieniazek PA, Shalhout FY, Skinner JL, Benderskii AV. Hydrogen bonding at the water surface revealed by isotopic dilution spectroscopy. Nature. 2011;474:192-195.
Li F, Skinner JL. Infrared and Raman line shapes for ice Ih. II. H2O and D2O (vol 133, 244504, 2010). Journal of Chemical Physics. 2011;134:244504.
Pieniazek PA, Tainter CJ, Skinner JL. Interpretation of the water surface vibrational sum-frequency spectrum. Journal of Chemical Physics. 2011;135:044701.
Tainter CJ, Pieniazek PA, Lin YS, Skinner JL. Robust three-body water simulation model. Journal of Chemical Physics. 2011;134:184501.
Pieniazek PA, Tainter CJ, Skinner JL. Surface of Liquid Water: Three-Body Interactions and Vibrational Sum-Frequency Spectroscopy. Journal of the American Chemical Society. 2011;133:10360-10363.
Skinner JL. Vibrational energy relaxation of small molecules and ions in liquids. Theoretical Chemistry Accounts. 2011;128:147-155.
Yang M, Li F, Skinner JL. Vibrational energy transfer and anisotropy decay in liquid water: Is the Forster model valid?. Journal of Chemical Physics. 2011;135:164505.
Gruenbaum SM, Pieniazek PA, Skinner JL. Vibrational spectroscopy of water in hydrated lipid multi-bilayers. II. Two-dimensional infrared and peak shift observables within different theoretical approximations. Journal of Chemical Physics. 2011;135:164506.
Gruenbaum SM, Skinner JL. Vibrational spectroscopy of water in hydrated lipid multi-bilayers. I. Infrared spectra and ultrafast pump-probe observables. Journal of Chemical Physics. 2011;135:075101.
2010
Woys AM, Lin Y-S, Reddy AS, Xiong W, De Pablo JJ, Skinner JL, Zanni MT. 2D IR Line Shapes Probe Ovispirin Peptide Conformation and Depth in Lipid Bilayers. Journal of the American Chemical Society. 2010;132:2832-2838.
Lin YS, Pieniazek PA, Yang M, Skinner JL. On the calculation of rotational anisotropy decay, as measured by ultrafast polarization-resolved vibrational pump-probe experiments. Journal of Chemical Physics. 2010;132:174505.
Skinner JL. Following the Motions of Water Molecules in Aqueous Solutions. Science. 2010;328:985-986.
Li F, Skinner JL. Infrared and Raman line shapes for ice Ih. I. Dilute HOD in H2O and D2O. Journal of Chemical Physics. 2010;132:204505.
Li F, Skinner JL. Infrared and Raman line shapes for ice Ih. II. H2O and D2O. Journal of Chemical Physics. 2010;133:244504.
Li F, Skinner JL. Infrared and Raman line shapes for ice Ih. II. H[sub 2]O and D[sub 2]O. The Journal of Chemical Physics. 2010;133:244504.
Yang EL, Liu CC, Yang CYP, Steinhaus CA, Nealey PF, Skinner JL. Nanofabrication of surface-enhanced Raman scattering device by an integrated block-copolymer and nanoimprint lithography method. Journal of Vacuum Science & Technology B. 2010;28:C6M93-C6M97.
Yang M, Skinner JL. Signatures of coherent vibrational energy transfer in IR and Raman line shapes for liquid water. Physical Chemistry Chemical Physics. 2010;12:982-991.
Reddy AS, Wang L, Lin Y-S, Ling Y, Chopra M, Zanni MT, Skinner JL, De Pablo JJ. Solution Structures of Rat Amylin Peptide: Simulation, Theory, and Experiment. Biophysical Journal. 2010;98:443-451.
Reddy AS, Wang L, Singh S, Ling YL, Buchanan L, Zanni MT, Skinner JL, De Pablo JJ. Stable and Metastable States of Human Amylin in Solution. Biophysical Journal. 2010;99:2208-2216.
Jansen TLC, Auer BM, Yang M, Skinner JL. Two-dimensional infrared spectroscopy and ultrafast anisotropy decay of water. Journal of Chemical Physics. 2010;132:224503.
Bakker HJ, Skinner JL. Vibrational Spectroscopy as a Probe of Structure and Dynamics in Liquid Water. Chemical Reviews. 2010;110:1498-1517.
2009
Lin YS, Shorb JM, Mukherjee P, Zanni MT, Skinner JL. Empirical Amide I Vibrational Frequency Map: Application to 2D-IR Line Shapes for Isotope-Edited Membrane Peptide Bundles. Journal of Physical Chemistry B. 2009;113:592-602.
Manor J, Mukherjee P, Lin YS, Leonov H, Skinner JL, Zanni MT, Arkin IT. Gating Mechanism of the Influenza A M2 Channel Revealed by 1D and 2D IR Spectroscopies. Structure. 2009:247-254.
Skinner JL, Auer BM, Lin YS. Vibrational Line Shapes, Spectral Diffusion, and Hydrogen Bonding in Liquid Water. Advances in Chemical Physics, Vol 142. 2009;142:59-103.
Pieniazek PA, Lin Y-S, Chowdhary J, Ladanyi BM, Skinner JL. Vibrational Spectroscopy and Dynamics of Water Confined inside Reverse Micelles. Journal of Physical Chemistry B. 2009;113:15017-15028.
Auer BM, Skinner JL. Vibrational Sum-Frequency Spectroscopy of the Water Liquid/Vapor Interface. Journal of Physical Chemistry B. 2009;113:4125-4130.
Auer BM, Skinner JL. Water: Hydrogen bonding and vibrational spectroscopy, in the bulk liquid and at the liquid/vapor interface. Chemical Physics Letters. 2009:13-20.
Lin YS, Auer BM, Skinner JL. Water structure, dynamics, and vibrational spectroscopy in sodium bromide solutions. Journal of Chemical Physics. 2009;131:144511.
2008
Auer BM, Skinner JL. IR and Raman spectra of liquid water: Theory and interpretation. Journal of Chemical Physics. 2008;128:224511.
Lin YS, Ramesh SG, Shorb JM, Sibert EL, Skinner JL. Vibrational energy relaxation of the bend fundamental of dilute water in liquid chloroform and d-chloroform. Journal of Physical Chemistry B. 2008;112:390-398.
Skinner JL. Vibrational line shapes and spectral diffusion in fluids. Molecular Physics. 2008;106:2245-2253.
Auer BM, Skinner JL. Vibrational sum-frequency spectroscopy of the liquid/vapor interface for dilute HOD in D2O. Journal of Chemical Physics. 2008;129:214705.
Moilanen DE, Fenn EE, Lin Y-S, Skinner JL, Bagchi B, Fayer MD. Water inertial reorientation: Hydrogen bond strength and the angular potential. Proceedings of the National Academy of Sciences of the United States of America. 2008;105:5295-5300.
Kumar R, Skinner JL. Water simulation model with explicit three-molecule interactions. Journal of Physical Chemistry B. 2008;112:8311-8318.
2007
Schmidt JR, Roberts ST, Loparo JJ, Tokmakoff A, Fayer MD, Skinner JL. Are water simulation models consistent with steady-state and ultrafast vibrational spectroscopy experiments?. Chemical Physics. 2007;341:143-157.
Auer BM, Skinner JL. Dynamical effects in line shapes for coupled chromophores: Time-averaging approximation. Journal of Chemical Physics. 2007;127:104105.
Kumar R, Schmidt JR, Skinner JL. Hydrogen bonding definitions and dynamics in liquid water. Journal of Chemical Physics. 2007;126:204107.
2006
Ediger MD, Skinner JL. Single molecules rock and roll near the glass transition. Science. 2006;110:507-511.
Li S, Schmidt JR, Skinner JL. Vibrational energy relaxation of azide in water. Journal of Chemical Physics. 2006;125:244507.
Li S, Schmidt JR, Piryatinski A, Lawrence CP, Skinner JL. Vibrational Spectral Diffusion of Azide in Water. Journal of Physical Chemistry B. 2006;110:18933-18938.

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