All Faculty and Research Staff Publications

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2018
Condon SGF, Deena-Al M, Armstrong CR, Diaz-Vazquez G, Craven SJ, LaPointe LM, Khadria AS, Chadda R, Crooks JA, Rangarajan N, et al. The FtsLB subcomplex of the bacterial divisome is a tetramer with an uninterrupted FtsL helix linking the transmembrane and periplasmic regions. Journal of Biological Chemistry. 2018 ;293:1623-1641.
Hodges HL, Brown RA, Crooks JA, Weibel DB, Kiessling LL. Imaging mycobacterial growth and division with a fluorogenic probe. Proceedings of the National Academy of Sciences of the United States of America. 2018 ;115:5271-5276.
Trivedi RR, Crooks JA, Auer GK, Pendry J, Foik IP, Siryaporn A, Abbott NL, Gitai Z, Weibel DB. Mechanical Genomic Studies Reveal the Role of d-Alanine Metabolism in Pseudomonas aeruginosa Cell Stiffness. Mbio. 2018 ;9.
Rojas ER, Billings G, Odermatt PD, Auer GK, Zhu L, Miguel A, Chang F, Weibel DB, Theriot JA, Huang KC. The outer membrane is an essential load-bearing element in Gram-negative bacteria. Nature. 2018 ;559:617-+.
Santos TMA, Lammers MG, Zhou MQ, Sparks IL, Rajendran M, Fang D, De Jesus CLY, Carneiro GFR, Cui Q, Weibel DB. Small Molecule Chelators Reveal That Iron Starvation Inhibits Late Stages of Bacterial Cytokinesis. ACS Chemical Biology. 2018 ;13:235-246.
Stilwell MD, Cao MY, Goodrich-Blair H, Weibel DB. Studying the Symbiotic Bacterium Xenorhabdus nematophila in Individual, Living Steinernema carpocapsae Nematodes Using Microfluidic Systems. Msphere. 2018 ;3.
2016
Faulkner KC, Hurley KA, Weibel DB. 5-Alkyloxytryptamines are membrane-targeting, broad-spectrum antibiotics. Bioorganic and Medicinal Chemistry Letters. 2016 ;26:5539-5544.
Dufour YS, Gillet S, Frankel NW, Weibel DB, Emonet T. Direct Correlation between Motile Behavior and Protein Abundance in Single Cells. Plos Computational Biology. 2016 ;12.
Zhang LL, Rajendram M, Weibel DB, Yethiraj A, Cui Q. Ionic Hydrogen Bonds and Lipid Packing Defects Determine the Binding Orientation and Insertion Depth of RecA on Multicomponent Lipid Bilayers. Journal of Physical Chemistry B. 2016 ;120:8424-8437.
Auer GK, Lee TK, Rajendram M, Cesar S, Miguel A, Huang KC, Weibel DB. Mechanical Genomics Identifies Diverse Modulators of Bacterial Cell Stiffness. Cell Systems. 2016 ;2:402-411.
Lin TY, Weibel DB. Organization and function of anionic phospholipids in bacteria. Applied Microbiology and Biotechnology. 2016 ;100:4255-4267.
Mushenheim PC, Pendery JS, Weibel DB, Spagnolie SE, Abbott NL. Straining soft colloids in aqueous nematic liquid crystals. Proceedings of the National Academy of Sciences of the United States of America. 2016 ;113:5564-5569.
Hurley KA, Santos TMA, Nepomuceno GM, Huynh V, Shaw JT, Weibel DB. Targeting the Bacterial Division Protein FtsZ. Journal of Medicinal Chemistry. 2016 ;59:6975-6998.
2015
Yin N, Stilwell MD, Santos TMA, Wang H, Weibel DB. Agarose particle-templated porous bacterial cellulose and its application in cartilage growth in vitro. Acta Biomaterialia. 2015 ;12:129-138.
Rajendram M, Zhang LL, Reynolds BJ, Auer GK, Tuson HH, Ngo KV, Cox MM, Yethiraj A, Cui Q, Weibel DB. Anionic Phospholipids Stabilize RecA Filament Bundles in Escherichia coli. Molecular Cell. 2015 ;60:374-384.
Trivedi RR, Maeda R, Abbott NL, Spagnolie SE, Weibel DB. Bacterial transport of colloids in liquid crystalline environments. Soft Matter. 2015 ;11:8404-8408.
Lin TY, Santos TMA, Kontur WS, Donohue TJ, Weibel DB. A Cardiolipin-Deficient Mutant of Rhodobacter sphaeroides Has an Altered Cell Shape and Is Impaired in Biofilm Formation. Journal of Bacteriology. 2015 ;197:3446-3455.
Crooks JA, Stilwell MD, Oliver PM, Zhong Z, Weibel DB. Decoding the Chemical Language of Motile Bacteria by Using High-Throughput Microfluidic Assays. Chembiochem. 2015 ;16:2151-2155.
Mushenheim PC, Trivedi RR, Roy SS, Arnold MS, Weibel DB, Abbott NL. Effects of confinement, surface-induced orientations and strain on dynamical behaviors of bacteria in thin liquid crystalline films. Soft Matter. 2015 ;11:6821-6831.
Derda R, Gitaka J, Klapperich CM, Mace CR, Kumar AA, Lieberman M, Linnes JC, Jores J, Nasimolo J, Ndung’u J, et al. Enabling the Development and Deployment of Next Generation Point-of-Care Diagnostics. PLoS Neglected Tropical Diseases. 2015 ;9.
Liljander A, Yu MY, O'Brien E, Heller M, Nepper JF, Weibel DB, Gluecks I, Younan M, Frey J, Falquet L, et al. Field-Applicable Recombinase Polymerase Amplification Assay for Rapid Detection of Mycoplasma capricolum subsp capripneumoniae. Journal of Clinical Microbiology. 2015 ;53:2810-2815.
Hurley KA, Heinrich VA, Hershfield JR, Demons ST, Weibel DB. Membrane-targeting dcap analogues with broad-spectrum antibiotic activity against pathogenic bacteria. Acs Medicinal Chemistry Letters. 2015 ;6:466-471.
2014
Yin N, Santos TMA, Auer GK, Crooks JA, Oliver PM, Weibel DB. Bacterial cellulose as a substrate for microbial cell culture. Applied and Environmental Microbiology. 2014 ;80:1926-1932.
Mushenheim PC, Trivedi RR, Tuson HH, Weibel DB, Abbott NL. Dynamic self-assembly of motile bacteria in liquid crystals. Soft MatterSoft Matter. 2014 ;10:88-95.
Rajendram M, Hurley KA, Foss MH, Thornton KM, Moore JT, Shaw JT, Weibel DB. Gyramides prevent bacterial growth by inhibiting DNA gyrase and altering chromosome topology. ACS Chemical Biology. 2014 ;9:1312-1319.
Oliver PM, Crooks JA, Leidl M, Yoon EJ, Saghatelian A, Weibel DB. Localization of anionic phospholipids in Escherichia coli cells. Journal of Bacteriology. 2014 ;196:3386-3398.
Hemling M, Crooks JA, Oliver PM, Brenner K, Gilbertson J, Lisensky GC, Weibel DB. Microfluidics for high school chemistry students. Journal of Chemical Education. 2014 ;91:112-115.
Santos TMA, Lin TY, Rajendran M, Anderson SM, Weibel DB. Polar localization of Escherichia coli chemoreceptors requires an intact Tol-Pal complex. Molecular Microbiology. 2014 ;92:985-1004.
Mushenheim PC, Trivedi RR, Weibel DB, Abbott NL. Using liquid crystals to reveal how mechanical anisotropy changes interfacial behaviors of motile bacteria. Biophysical JournalBiophysical Journal. 2014 ;107:255-65.
2013
Jakiela S, S. Tomasz K, Cybulski O, Weibel DB, Garstecki P. Bacterial Growth and Adaptation in Microdroplet Chemostats. Angewandte Chemie-International Edition. 2013 .
Tuson HH, Weibel DB. Bacteria-surface interactions. Soft Matter. 2013 ;9:4368-4380.
Weibel DB. A chemist building paths to cell biology. Molecular Biology of the Cell. 2013 ;24:3264-3266.
Eun Y-J, Zhou M, Kiekebusch D, Schlimpert S, Trivedi RR, Bakshi S, Zhong Z, Wahlig TA, Thanbichler M, Weibel DB. Divin: a small molecule inhibitor of bacterial divisome assembly. Journal of the American Chemical Society. 2013 ;135:9768-9776.
Shkoporov AN, Efimov BA, Khokhlova EV, Chaplin AV, Kafarskaya LI, Durkin AS, McCorrison J, Torralba M, Gillis M, Sutton G, et al. Draft Genome Sequences of Two Pairs of Human Intestinal Bifidobacterium longum subsp. longum Strains, 44B and 1-6B and 35B and 2-2B, Consecutively Isolated from Two Children after a 5-Year Time Period. Genome announcements. 2013 ;1.
Tuson HH, Copeland MF, Carey S, Sacotte R, Weibel DB. Flagellum Density Regulates Proteus mirabilis Swarmer Cell Motility in Viscous Environments. Journal of Bacteriology. 2013 ;195:368-377.
Swiecicki JM, Sliusarenko O, Weibel DB. From swimming to swarming: Escherichia coli cell motility in two-dimensions. Integrative Biology (United Kingdom). 2013 ;5:1490-1494.
Foss MH, Eun YJ, Grove CI, Pauw DA, Sorto NA, Rensvold JW, Pagliarini DJ, Shaw JT, Weibel DB. Inhibitors of bacterial tubulin target bacterial membranes in vivo. Medchemcomm. 2013 ;4:112-119.
Oliver PM, Crooks JA, Yoon EJ, Weibel DB. A Revised Model of Nonyl Acridine Orange Binding to Anionic Phospholipids. Biophysical Journal. 2013 ;104:373A-374A.
Zhou MQ, Eun YJ, Guzei IA, Weibel DB. Structure-Activity Studies of Divin: An Inhibitor of Bacterial Cell Division. Acs Medicinal Chemistry Letters. 2013 ;4:880-885.
Renner LD, Eswaramoorthy P, Ramamurthi KS, Weibel DB. Studying biomolecule localization by engineering bacterial cell wall curvature. Plos One. 2013 ;8.

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