| American Chemical Society Arthur C. Cope Scholar Award | Shannon Stahl |
| Fellow, American Association for the Advancement of Science | Shannon Stahl |
| Alexander von Humbolt Senior Research Award | Shannon Stahl |
| Moore Faculty Scholar, California Institute of Technology | Shannon Stahl |
| Hamel Family Faculty Fellow, University of Wisconsin-Madison | Shannon Stahl |
| Outstanding Mentor Award, Department of Chemistry, University of Wisconsin-Madison (Inaugural Award) | Shannon Stahl |
| WARF Romnes Faculty Fellowship, University of Wisconsin-Madison | Shannon Stahl |
| Pfizer Michigan Green Chemistry Award | Shannon Stahl |
| Camille and Henry Dreyfus Teacher-Scholar Award | Shannon Stahl |
| 3M Corporation Non-tenured Faculty Award | Shannon Stahl |
| Fellow, Alfred P. Sloan Research Foundation | Shannon Stahl |
| National Science Foundation CAREER Award | Shannon Stahl |
| Dow Chemical Research Innovation Award | Shannon Stahl |
| Research Corporation Innovation Award 2001-2002 | Shannon Stahl |
| Camille and Henry Dreyfus Foundation New Faculty Award | Shannon Stahl |
| Herbert Newby McCoy Award, Chemistry Department Thesis Award | Shannon Stahl |
| National Science Foundation Postdoctoral Fellowship in Biosciences Related to the Environment | Shannon Stahl |
| National Science Foundation Predoctoral Fellowship | Shannon Stahl |
| National Science Foundation Predoctoral Fellowship | Shannon Stahl |