| Jeremy Knowles Award, Royal Society of Chemistry | Ronald T. Raines |
| Repligen Award in Biological Chemistry, American Chemical Society | Ronald T. Raines |
| Kellett Mid-Career Faculty Researcher Award, University of Wisconsin-Madison | Ronald T. Raines |
| Rao Makineni Lectureship Award, American Peptide Society | Ronald T. Raines |
| Technology Achievement Award, MIT Club of Wisconsin | Ronald T. Raines |
| Fellow, Royal Society of Chemistry | Ronald T. Raines |
| Emil Thomas Kaiser Award, Protein Society | Ronald T. Raines |
| Arthur C. Cope Scholar Award, American Chemical Society | Ronald T. Raines |
| Pfizer Award in Enzyme Chemistry, American Chemical Society | Ronald T. Raines |
| WARF Romnes Faculty Fellowship, University of Wisconsin-Madison | Ronald T. Raines |
| Pound Research Award, University of Wisconsin-Madison | Ronald T. Raines |
| Junior Faculty Research Award, American Cancer Society | Ronald T. Raines |
| Shaw Scientist Award, Milwaukee Foundation, 1991-1996 | Ronald T. Raines |
| National Science Foundation Presidential Young Investigator Award | Ronald T. Raines |
| Searle Scholar Award, Chicago Community Trust, 1990-1993 | Ronald T. Raines |
| Postdoctoral Fellowship, Helen Hay Whitney Foundation | Ronald T. Raines |
| Predoctoral Fellowship, National Institute of Health | Ronald T. Raines |